Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.3□□□□□ -1.56
CCNFP41002 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.3□□□□□ -1.56
CCNFP41002 GLUD1P4-201ENST00000590914 418 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNFP41002 AC087763.1-201ENST00000603391 286 ntBASIC5.3□□□□□ -1.56
CCNFP41002 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.3□□□□□ -1.56
CCNFP41002 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNFP41002 uc_338.12-201ENST00000616344 181 ntBASIC5.3□□□□□ -1.56
CCNFP41002 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNFP41002 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCNFP41002 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCNFP41002 AC091046.3-201ENST00000631455 1574 ntBASIC5.29□□□□□ -1.56
CCNFP41002 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNFP41002 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCNFP41002 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNFP41002 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 RNA5SP234-201ENST00000363916 119 ntBASIC5.29□□□□□ -1.56
CCNFP41002 RNU6-39P-201ENST00000384344 107 ntBASIC5.29□□□□□ -1.56
CCNFP41002 RNU6-510P-201ENST00000391239 108 ntBASIC5.29□□□□□ -1.56
CCNFP41002 SNORA68.2-201ENST00000391263 128 ntBASIC5.29□□□□□ -1.56
CCNFP41002 AC007738.1-201ENST00000413892 348 ntBASIC5.29□□□□□ -1.56
CCNFP41002 SRSF1P1-201ENST00000424058 520 ntBASIC5.29□□□□□ -1.56
CCNFP41002 DUTP6-201ENST00000425573 462 ntBASIC5.29□□□□□ -1.56
CCNFP41002 AC008065.1-201ENST00000428525 348 ntBASIC5.29□□□□□ -1.56
CCNFP41002 GSTM5P1-201ENST00000434751 660 ntBASIC5.29□□□□□ -1.56
CCNFP41002 RPS20P5-201ENST00000434808 360 ntBASIC5.29□□□□□ -1.56
CCNFP41002 RPS11P7-201ENST00000442125 465 ntBASIC5.29□□□□□ -1.56
CCNFP41002 RAC1P7-201ENST00000445367 377 ntBASIC5.29□□□□□ -1.56
CCNFP41002 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 DDX3P2-201ENST00000446138 111 ntBASIC5.29□□□□□ -1.56
CCNFP41002 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 NANOGP10-201ENST00000453325 895 ntBASIC5.29□□□□□ -1.56
CCNFP41002 AC233279.1-201ENST00000455300 423 ntBASIC5.29□□□□□ -1.56
CCNFP41002 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNFP41002 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 RN7SL174P-201ENST00000475578 289 ntBASIC5.29□□□□□ -1.56
CCNFP41002 AC058823.1-201ENST00000485315 474 ntBASIC5.29□□□□□ -1.56
CCNFP41002 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNFP41002 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNFP41002 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNFP41002 AP004607.2-201ENST00000533949 322 ntBASIC5.29□□□□□ -1.56
CCNFP41002 AC128657.1-201ENST00000549459 145 ntBASIC5.29□□□□□ -1.56
CCNFP41002 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.29□□□□□ -1.56
CCNFP41002 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNFP41002 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 MIR6768-201ENST00000610734 72 ntBASIC5.29□□□□□ -1.56
CCNFP41002 AL590099.1-201ENST00000615276 138 ntBASIC5.29□□□□□ -1.56
CCNFP41002 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCNFP41002 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCNFP41002 AC083843.3-201ENST00000623679 2186 ntBASIC5.29□□□□□ -1.56
CCNFP41002 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCNFP41002 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CCNFP41002 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
CCNFP41002 ASNSP3-201ENST00000451989 1306 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL645937.1-201ENST00000641739 1652 ntBASIC5.28□□□□□ -1.56
CCNFP41002 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCNFP41002 Y_RNA.162-201ENST00000363683 102 ntBASIC5.28□□□□□ -1.56
CCNFP41002 RNU5A-8P-201ENST00000364102 114 ntBASIC5.28□□□□□ -1.56
CCNFP41002 RNA5SP132-201ENST00000364725 118 ntBASIC5.28□□□□□ -1.56
CCNFP41002 Y_RNA.394-201ENST00000383942 103 ntBASIC5.28□□□□□ -1.56
CCNFP41002 OR3A2-201ENST00000408891 1076 ntBASIC5.28□□□□□ -1.56
CCNFP41002 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL354751.2-201ENST00000415471 210 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AC069213.2-201ENST00000420238 366 ntBASIC5.28□□□□□ -1.56
CCNFP41002 MTCO2P12-201ENST00000427426 682 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AC005534.2-201ENST00000431047 433 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL391987.1-201ENST00000441025 200 ntBASIC5.28□□□□□ -1.56
CCNFP41002 GAPDHP25-201ENST00000447061 1001 ntBASIC5.28□□□□□ -1.56
CCNFP41002 HMGB3P21-201ENST00000452483 547 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNFP41002 RNA5SP103-201ENST00000459503 118 ntBASIC5.28□□□□□ -1.56
CCNFP41002 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNFP41002 RN7SL591P-201ENST00000496150 292 ntBASIC5.28□□□□□ -1.56
CCNFP41002 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNFP41002 HSPD1P15-201ENST00000505573 1122 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNFP41002 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNFP41002 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.28□□□□□ -1.56
CCNFP41002 AC112206.3-201ENST00000514578 389 ntBASIC5.28□□□□□ -1.56
CCNFP41002 OR5B10P-201ENST00000532869 642 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AC087241.2-201ENST00000535801 324 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.28□□□□□ -1.56
CCNFP41002 AL390726.5-202ENST00000564800 256 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNFP41002 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNFP41002 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNFP41002 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNFP41002 AC005498.1-201ENST00000592125 465 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL162431.4-201ENST00000604674 411 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AC004853.1-201ENST00000604902 698 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL133255.1-201ENST00000606374 441 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms