Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 AC103705.1-201ENST00000619013 241 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 AC010378.1-201ENST00000619270 362 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.74□□□□□ -1.49
NFKB1P19838 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.74□□□□□ -1.49
NFKB1P19838 OR55B1P-203ENST00000641518 2602 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
NFKB1P19838 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 RBPJP2-201ENST00000618187 1444 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.74□□□□□ -1.49
NFKB1P19838 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NFKB1P19838 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NFKB1P19838 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
NFKB1P19838 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NFKB1P19838 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NFKB1P19838 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
NFKB1P19838 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NFKB1P19838 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 AL445437.1-201ENST00000623157 3087 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 RNU6-278P-201ENST00000390945 109 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AL136372.1-201ENST00000403060 228 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AL391417.1-201ENST00000404100 426 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 MIR548I3-201ENST00000408378 149 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 MIR548I1-201ENST00000408810 149 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 HMGN1P20-201ENST00000411849 300 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 RPL6P29-201ENST00000414863 865 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.73□□□□□ -1.49
NFKB1P19838 REREP1Y-201ENST00000422655 198 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.73□□□□□ -1.49
NFKB1P19838 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.73□□□□□ -1.49
NFKB1P19838 SNAP23P1-201ENST00000433229 246 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 RPL7P28-201ENST00000437739 740 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 REREP2Y-201ENST00000439103 200 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.73□□□□□ -1.49
NFKB1P19838 AC104634.1-201ENST00000452720 462 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 GSTA11P-201ENST00000452866 669 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 GLUD1P3-202ENST00000508551 200 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AC104057.1-201ENST00000515547 497 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 RN7SKP70-201ENST00000516655 271 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.73□□□□□ -1.49
NFKB1P19838 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.73□□□□□ -1.49
NFKB1P19838 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NFKB1P19838 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.73□□□□□ -1.49
NFKB1P19838 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.73□□□□□ -1.49
NFKB1P19838 MIR4504-201ENST00000577413 92 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.73□□□□□ -1.49
NFKB1P19838 AC024619.4-201ENST00000580924 316 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.73□□□□□ -1.49
NFKB1P19838 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.73□□□□□ -1.49
NFKB1P19838 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 AL138726.1-201ENST00000614873 333 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AL355365.1-201ENST00000616480 294 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 AC025034.2-201ENST00000623264 286 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NFKB1P19838 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
NFKB1P19838 OR4F13P-202ENST00000560066 2054 ntBASIC5.73□□□□□ -1.49
NFKB1P19838 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NFKB1P19838 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.72□□□□□ -1.49
NFKB1P19838 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NFKB1P19838 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 AC009962.1-201ENST00000567327 3813 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
NFKB1P19838 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.72□□□□□ -1.49
NFKB1P19838 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NFKB1P19838 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NFKB1P19838 RN7SKP185-201ENST00000362813 326 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 RNU6-238P-201ENST00000363313 106 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 Y_RNA.307-201ENST00000365022 117 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 RNU6-1226P-201ENST00000384317 107 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NFKB1P19838 AL031985.1-201ENST00000392713 418 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 RPS3AP2-201ENST00000407190 754 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 RNU4-25P-201ENST00000410569 230 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 RNU4-46P-201ENST00000410818 138 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 HMGN1P24-201ENST00000412282 298 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.72□□□□□ -1.49
NFKB1P19838 DPH3P2-201ENST00000422618 250 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms