Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.12□□□□□ -1.75
TOP2AP11388 FAT1P1-201ENST00000406588 507 ntBASIC4.12□□□□□ -1.75
TOP2AP11388 RPL36AP33-201ENST00000450395 310 ntBASIC4.12□□□□□ -1.75
TOP2AP11388 RPS20P22-201ENST00000473700 357 ntBASIC4.12□□□□□ -1.75
TOP2AP11388 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.12□□□□□ -1.75
TOP2AP11388 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.12□□□□□ -1.75
TOP2AP11388 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.12□□□□□ -1.75
TOP2AP11388 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP2AP11388 AC026634.1-201ENST00000634369 198 ntBASIC4.12□□□□□ -1.75
TOP2AP11388 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TOP2AP11388 SNORA41-201ENST00000384675 132 ntBASIC4.11□□□□□ -1.75
TOP2AP11388 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP2AP11388 AL513175.2-201ENST00000422071 443 ntBASIC4.11□□□□□ -1.75
TOP2AP11388 AC107015.1-201ENST00000466902 747 ntBASIC4.11□□□□□ -1.75
TOP2AP11388 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
TOP2AP11388 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TOP2AP11388 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.11□□□□□ -1.75
TOP2AP11388 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP2AP11388 AC025281.1-201ENST00000567026 265 ntBASIC4.11□□□□□ -1.75
TOP2AP11388 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.11□□□□□ -1.75
TOP2AP11388 AL137072.1-201ENST00000603444 466 ntBASIC4.11□□□□□ -1.75
TOP2AP11388 AP006248.2-201ENST00000623309 592 ntBASIC4.11□□□□□ -1.75
TOP2AP11388 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.11□□□□□ -1.75
TOP2AP11388 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.11□□□□□ -1.75
TOP2AP11388 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TOP2AP11388 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP2AP11388 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP2AP11388 AC022884.3-201ENST00000579571 248 ntBASIC4.11□□□□□ -1.75
TOP2AP11388 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP2AP11388 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP2AP11388 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.1□□□□□ -1.75
TOP2AP11388 AC068587.2-201ENST00000478386 781 ntBASIC4.1□□□□□ -1.75
TOP2AP11388 SUMO2P4-201ENST00000504193 276 ntBASIC4.1□□□□□ -1.75
TOP2AP11388 AC112673.1-201ENST00000513168 575 ntBASIC4.1□□□□□ -1.75
TOP2AP11388 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.1□□□□□ -1.75
TOP2AP11388 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP2AP11388 BX664608.1-201ENST00000610519 487 ntBASIC4.1□□□□□ -1.75
TOP2AP11388 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP2AP11388 AC099063.3-201ENST00000642066 185 ntBASIC4.1□□□□□ -1.75
TOP2AP11388 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP2AP11388 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOP2AP11388 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TOP2AP11388 SNORD21-201ENST00000383953 95 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 AC244505.4-201ENST00000434905 287 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 CACYBPP1-201ENST00000438592 684 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 SSXP5-201ENST00000443473 287 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP2AP11388 RPL21P71-201ENST00000465598 459 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 RPL21P99-201ENST00000480369 423 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 AC106872.3-201ENST00000495104 446 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 RPS26P24-201ENST00000497656 331 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 RANP3-201ENST00000530970 276 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP2AP11388 AC116158.1-201ENST00000560231 2129 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.09□□□□□ -1.75
TOP2AP11388 AC103798.2-201ENST00000624292 632 ntBASIC4.09□□□□□ -1.75
TOP2AP11388 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TOP2AP11388 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TOP2AP11388 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TOP2AP11388 Z99496.1-201ENST00000469424 1477 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.08□□□□□ -1.76
TOP2AP11388 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TOP2AP11388 FAM133CP-201ENST00000332869 704 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 AC073136.2-201ENST00000417282 849 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 MTND6P18-201ENST00000439477 513 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 MTCO3P11-201ENST00000455103 774 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 RNU7-170P-201ENST00000459303 61 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 AC104090.1-201ENST00000506341 1171 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP2AP11388 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP2AP11388 SNRPGP18-201ENST00000553000 214 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.08□□□□□ -1.76
TOP2AP11388 AC009318.2-201ENST00000610917 651 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 AC069234.5-201ENST00000611056 416 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 AC123768.4-201ENST00000616244 701 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 MIR6766-201ENST00000622641 72 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.08□□□□□ -1.76
TOP2AP11388 AC095050.2-201ENST00000510748 1458 ntBASIC4.08□□□□□ -1.76
TOP2AP11388 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TOP2AP11388 RNU6-482P-201ENST00000391068 107 ntBASIC4.07□□□□□ -1.76
TOP2AP11388 Z98742.2-201ENST00000431564 187 ntBASIC4.07□□□□□ -1.76
TOP2AP11388 RPL9P33-201ENST00000484311 566 ntBASIC4.07□□□□□ -1.76
TOP2AP11388 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP2AP11388 TRAV37-201ENST00000553906 342 ntBASIC4.07□□□□□ -1.76
TOP2AP11388 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP2AP11388 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP2AP11388 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP2AP11388 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.07□□□□□ -1.76
TOP2AP11388 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
TOP2AP11388 RNU6-304P-201ENST00000364855 107 ntBASIC4.06□□□□□ -1.76
TOP2AP11388 SNORA64-201ENST00000384674 134 ntBASIC4.06□□□□□ -1.76
TOP2AP11388 AC107081.1-201ENST00000414975 361 ntBASIC4.06□□□□□ -1.76
TOP2AP11388 BTG3P1-201ENST00000435859 716 ntBASIC4.06□□□□□ -1.76
TOP2AP11388 RPS4XP6-201ENST00000477670 797 ntBASIC4.06□□□□□ -1.76
TOP2AP11388 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP2AP11388 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.06□□□□□ -1.76
TOP2AP11388 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.06□□□□□ -1.76
TOP2AP11388 NRBF2P1-201ENST00000587407 859 ntBASIC4.06□□□□□ -1.76
TOP2AP11388 AC087468.1-201ENST00000604365 630 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms