Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MTND4P26-201ENST00000415971 1359 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC6P09630 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC6P09630 AC109315.1-201ENST00000584143 1347 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC6P09630 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC6P09630 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC6P09630 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC6P09630 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC6P09630 OR52E6-202ENST00000379946 954 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 Y_RNA.559-201ENST00000384686 107 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HOXC6P09630 SNORA26.8-201ENST00000391306 124 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 MRPS36P1-201ENST00000421291 307 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC006366.1-201ENST00000422002 759 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 RPS3AP44-201ENST00000425466 790 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AL009174.1-201ENST00000426577 416 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC244035.1-201ENST00000430042 390 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC6P09630 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC6P09630 SEPT7P5-201ENST00000434048 306 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AL353748.1-201ENST00000440753 474 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC6P09630 MTCO2P3-201ENST00000442543 421 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC6P09630 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC6P09630 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC6P09630 RPL12P26-201ENST00000452430 487 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 RPL30P6-201ENST00000475925 342 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 GAPDHP39-201ENST00000481866 979 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AL024509.2-201ENST00000493462 493 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC6P09630 HSPD1P15-201ENST00000505573 1122 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC6P09630 AC091965.2-201ENST00000512324 613 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC6P09630 AC105185.1-201ENST00000518705 535 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC6P09630 RFPL1S-203ENST00000539579 330 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC6P09630 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC6P09630 AC037471.2-201ENST00000564941 598 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXC6P09630 AC006362.1-201ENST00000567392 174 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC6P09630 AGGF1P4-201ENST00000568249 801 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC6P09630 AC073544.2-201ENST00000601155 540 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXC6P09630 SNORA62.6-201ENST00000606322 83 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC243654.2-201ENST00000612843 443 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC023158.2-201ENST00000614876 543 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC090582.1-201ENST00000636321 199 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC6P09630 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC6P09630 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC6P09630 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HOXC6P09630 AC010329.2-201ENST00000595195 2737 ntBASIC4.28□□□□□ -1.72
HOXC6P09630 AC093311.1-201ENST00000506586 2021 ntBASIC4.28□□□□□ -1.73
HOXC6P09630 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC6P09630 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC6P09630 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC6P09630 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC6P09630 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC6P09630 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC6P09630 AC005539.1-201ENST00000443768 1479 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HOXC6P09630 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC6P09630 OR5H15-201ENST00000383696 930 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 SOD2P1-201ENST00000396543 562 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 NDUFB4P4-201ENST00000404822 243 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AL022400.1-201ENST00000423946 935 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC6P09630 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 MTCYBP39-201ENST00000437562 491 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC006480.1-201ENST00000449887 378 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC022795.1-201ENST00000473808 480 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 RPL7P24-201ENST00000493052 752 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AL035404.1-201ENST00000497982 568 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC6P09630 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 RANP9-201ENST00000519957 271 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC087808.1-201ENST00000520501 361 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC005832.3-201ENST00000537929 631 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC007458.1-201ENST00000542812 373 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms