Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AP001207.2-201ENST00000519490 539 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
SEMA3DO95025 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.06□□□□□ -1.92
SEMA3DO95025 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.06□□□□□ -1.92
SEMA3DO95025 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.06□□□□□ -1.92
SEMA3DO95025 RPL21P12-201ENST00000559810 515 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.06□□□□□ -1.92
SEMA3DO95025 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.06□□□□□ -1.92
SEMA3DO95025 AC011978.2-201ENST00000569835 2054 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 ZNF92P2-201ENST00000600543 1059 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 AL591516.1-201ENST00000611326 274 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 uc_338.25-201ENST00000613756 156 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.06□□□□□ -1.92
SEMA3DO95025 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SEMA3DO95025 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SEMA3DO95025 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SEMA3DO95025 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SEMA3DO95025 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
SEMA3DO95025 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SEMA3DO95025 MTND4P8-201ENST00000514997 1362 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SEMA3DO95025 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SEMA3DO95025 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SEMA3DO95025 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SEMA3DO95025 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SEMA3DO95025 RNU6-650P-201ENST00000365658 111 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SEMA3DO95025 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.05□□□□□ -1.92
SEMA3DO95025 RNU6-1181P-201ENST00000384191 106 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SEMA3DO95025 ATP5F1P3-201ENST00000397213 657 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 RNA5SP129-201ENST00000410276 118 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 VN1R42P-201ENST00000424651 344 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 AC073508.1-201ENST00000428866 656 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 SETP8-201ENST00000435341 628 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 YWHAZP8-201ENST00000436935 731 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.05□□□□□ -1.92
SEMA3DO95025 AC004865.1-201ENST00000442276 1003 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 RPL36AP33-201ENST00000450395 310 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 DNAJC19P8-201ENST00000452887 259 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.05□□□□□ -1.92
SEMA3DO95025 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.05□□□□□ -1.92
SEMA3DO95025 RPL21P18-201ENST00000469899 480 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 AL136126.1-201ENST00000473603 402 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.05□□□□□ -1.92
SEMA3DO95025 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.05□□□□□ -1.92
SEMA3DO95025 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.05□□□□□ -1.92
SEMA3DO95025 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.05□□□□□ -1.92
SEMA3DO95025 CCNG2P1-201ENST00000549521 1000 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.05□□□□□ -1.92
SEMA3DO95025 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.05□□□□□ -1.92
SEMA3DO95025 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.05□□□□□ -1.92
SEMA3DO95025 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.05□□□□□ -1.92
SEMA3DO95025 MTCO3P24-201ENST00000572729 782 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.05□□□□□ -1.92
SEMA3DO95025 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.05□□□□□ -1.92
SEMA3DO95025 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.05□□□□□ -1.92
SEMA3DO95025 AC073387.2-201ENST00000604797 784 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 RMST_10.1-201ENST00000616309 154 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 FRG1HP-204ENST00000617940 757 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 MIR7975-201ENST00000619350 68 ntBASIC3.05□□□□□ -1.92
SEMA3DO95025 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.05□□□□□ -1.92
SEMA3DO95025 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
SEMA3DO95025 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.05□□□□□ -1.92
SEMA3DO95025 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.04□□□□□ -1.92
SEMA3DO95025 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SEMA3DO95025 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SEMA3DO95025 AL512646.1-201ENST00000269395 1077 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SEMA3DO95025 RNU6-50P-201ENST00000362356 103 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SEMA3DO95025 UBE2V1P11-201ENST00000411559 285 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.04□□□□□ -1.92
SEMA3DO95025 OR2AS1P-201ENST00000427827 319 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 OR51AB1P-201ENST00000429046 620 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.04□□□□□ -1.92
SEMA3DO95025 AL590762.3-201ENST00000436372 640 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.04□□□□□ -1.92
SEMA3DO95025 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.04□□□□□ -1.92
SEMA3DO95025 GAPDHP27-201ENST00000447427 1020 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 RPL23AP15-201ENST00000450202 459 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AL035407.2-201ENST00000454090 378 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AC109925.1-201ENST00000478069 331 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.04□□□□□ -1.92
SEMA3DO95025 WBP1LP4-201ENST00000505043 344 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.04□□□□□ -1.92
SEMA3DO95025 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.04□□□□□ -1.92
SEMA3DO95025 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.04□□□□□ -1.92
SEMA3DO95025 OSBPL9P3-201ENST00000534523 595 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AP003717.3-201ENST00000544832 1180 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.04□□□□□ -1.92
SEMA3DO95025 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.04□□□□□ -1.92
SEMA3DO95025 AC090312.2-201ENST00000582687 378 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.04□□□□□ -1.92
SEMA3DO95025 AC107308.1-201ENST00000615897 301 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 U73479.1-201ENST00000618062 168 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AC018926.3-201ENST00000618841 406 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AC073569.3-201ENST00000619055 682 ntBASIC3.04□□□□□ -1.92
SEMA3DO95025 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms