Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HSPE1P28-201ENST00000443139 211 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 RPL7P31-201ENST00000450192 724 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.81□□□□□ -1.8
ZIC3O60481 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 AC103987.1-201ENST00000473394 348 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC017015.1-201ENST00000477387 286 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AP000797.1-201ENST00000478870 387 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 RPS29P19-201ENST00000479709 171 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 FAM172BP-201ENST00000487497 1089 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC108145.1-201ENST00000503770 153 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.81□□□□□ -1.8
ZIC3O60481 AC022447.3-201ENST00000506865 495 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC109458.1-201ENST00000508858 316 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC024589.1-201ENST00000512207 263 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC108043.1-201ENST00000512696 574 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 OR5AP1P-201ENST00000529730 940 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 DYNLL1P4-201ENST00000549314 266 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.81□□□□□ -1.8
ZIC3O60481 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.81□□□□□ -1.8
ZIC3O60481 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.81□□□□□ -1.8
ZIC3O60481 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.81□□□□□ -1.8
ZIC3O60481 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.81□□□□□ -1.8
ZIC3O60481 AP001180.3-201ENST00000582221 145 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 MIR548AB-201ENST00000584917 84 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 OR4G1P-201ENST00000588632 938 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC025588.3-201ENST00000604182 274 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC100793.4-201ENST00000613683 429 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC010678.1-201ENST00000614118 713 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC090116.1-201ENST00000615679 446 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 AC004009.2-201ENST00000623016 728 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.81□□□□□ -1.8
ZIC3O60481 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
ZIC3O60481 AL592437.2-201ENST00000421655 2434 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZIC3O60481 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.8□□□□□ -1.8
ZIC3O60481 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZIC3O60481 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
ZIC3O60481 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
ZIC3O60481 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.8□□□□□ -1.8
ZIC3O60481 AC006378.2-201ENST00000623178 2476 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.8□□□□□ -1.8
ZIC3O60481 FGF7P2-201ENST00000332473 296 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 SNORD82-201ENST00000365530 70 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 SNORA75-201ENST00000384158 137 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 HDGFP1-201ENST00000405943 252 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 RPL17P12-201ENST00000413391 526 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZIC3O60481 CDK8P2-201ENST00000415020 547 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 OFD1P18Y-201ENST00000420889 959 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.8□□□□□ -1.8
ZIC3O60481 MTCO2P5-201ENST00000422621 426 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.8□□□□□ -1.8
ZIC3O60481 AL356276.2-201ENST00000435919 558 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.8□□□□□ -1.8
ZIC3O60481 RSU1P2-202ENST00000437884 485 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC127537.2-201ENST00000439258 465 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC002381.1-201ENST00000447049 280 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.8□□□□□ -1.8
ZIC3O60481 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.8□□□□□ -1.8
ZIC3O60481 RNA5SP246-201ENST00000458909 119 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC079804.1-201ENST00000461922 436 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.8□□□□□ -1.8
ZIC3O60481 RPL7P19-201ENST00000469948 618 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.8□□□□□ -1.8
ZIC3O60481 AC106872.3-201ENST00000495104 446 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.8□□□□□ -1.8
ZIC3O60481 AC113430.1-201ENST00000506872 718 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.8□□□□□ -1.8
ZIC3O60481 RN7SKP234-201ENST00000517173 224 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 AC025881.1-201ENST00000518851 512 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZIC3O60481 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.8□□□□□ -1.8
ZIC3O60481 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.8□□□□□ -1.8
ZIC3O60481 MIR4307-201ENST00000582802 84 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.8□□□□□ -1.8
ZIC3O60481 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.8□□□□□ -1.8
ZIC3O60481 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.8□□□□□ -1.8
ZIC3O60481 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.8□□□□□ -1.8
ZIC3O60481 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.8□□□□□ -1.8
ZIC3O60481 AC013562.2-201ENST00000611632 603 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 MIR492-201ENST00000638676 116 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
ZIC3O60481 AL139811.1-201ENST00000424779 2299 ntBASIC3.8□□□□□ -1.8
ZIC3O60481 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
ZIC3O60481 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZIC3O60481 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ZIC3O60481 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZIC3O60481 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZIC3O60481 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZIC3O60481 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.8□□□□□ -1.8
ZIC3O60481 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ZIC3O60481 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ZIC3O60481 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.79□□□□□ -1.8
ZIC3O60481 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms