Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TOMM22P1-201ENST00000418578 312 ntBASIC3.16□□□□□ -1.9
CDC7O00311 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.16□□□□□ -1.9
CDC7O00311 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.16□□□□□ -1.9
CDC7O00311 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.16□□□□□ -1.9
CDC7O00311 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC7O00311 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDC7O00311 MTND3P24-201ENST00000506306 329 ntBASIC3.16□□□□□ -1.9
CDC7O00311 SNORA74D-201ENST00000516404 141 ntBASIC3.16□□□□□ -1.9
CDC7O00311 IGKV2D-36-201ENST00000518643 226 ntBASIC3.16□□□□□ -1.9
CDC7O00311 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC7O00311 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.16□□□□□ -1.9
CDC7O00311 OR4H12P-201ENST00000556269 907 ntBASIC3.16□□□□□ -1.9
CDC7O00311 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.16□□□□□ -1.9
CDC7O00311 MIR2682-201ENST00000580305 110 ntBASIC3.16□□□□□ -1.9
CDC7O00311 ZNF415P1-201ENST00000582279 1166 ntBASIC3.16□□□□□ -1.9
CDC7O00311 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.16□□□□□ -1.9
CDC7O00311 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC7O00311 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.16□□□□□ -1.9
CDC7O00311 AC016542.1-201ENST00000608259 493 ntBASIC3.16□□□□□ -1.9
CDC7O00311 MIR8084-201ENST00000614105 89 ntBASIC3.16□□□□□ -1.9
CDC7O00311 AC009464.1-201ENST00000615731 469 ntBASIC3.16□□□□□ -1.9
CDC7O00311 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC7O00311 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDC7O00311 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.16□□□□□ -1.9
CDC7O00311 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
CDC7O00311 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDC7O00311 AL672296.1-201ENST00000427780 2158 ntBASIC3.15□□□□□ -1.9
CDC7O00311 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDC7O00311 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CDC7O00311 RNU6-335P-201ENST00000364563 113 ntBASIC3.15□□□□□ -1.91
CDC7O00311 RNU6-1226P-201ENST00000384317 107 ntBASIC3.15□□□□□ -1.91
CDC7O00311 HSPE1P26-201ENST00000405341 275 ntBASIC3.15□□□□□ -1.91
CDC7O00311 MIR1250-201ENST00000408098 113 ntBASIC3.15□□□□□ -1.91
CDC7O00311 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
CDC7O00311 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.15□□□□□ -1.91
CDC7O00311 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.15□□□□□ -1.91
CDC7O00311 AC091390.3-201ENST00000426478 338 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AL009174.1-201ENST00000426577 416 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AL159987.2-201ENST00000432754 307 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AC005019.1-201ENST00000436455 431 ntBASIC3.15□□□□□ -1.91
CDC7O00311 CYCSP43-201ENST00000438233 310 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.15□□□□□ -1.91
CDC7O00311 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.15□□□□□ -1.91
CDC7O00311 AC125238.1-201ENST00000448842 249 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AL096803.2-201ENST00000450032 677 ntBASIC3.15□□□□□ -1.91
CDC7O00311 GTF2IP12-201ENST00000456547 356 ntBASIC3.15□□□□□ -1.91
CDC7O00311 RPS4XP10-201ENST00000465034 731 ntBASIC3.15□□□□□ -1.91
CDC7O00311 RPS4XP6-201ENST00000477670 797 ntBASIC3.15□□□□□ -1.91
CDC7O00311 RPL23AP55-201ENST00000498163 452 ntBASIC3.15□□□□□ -1.91
CDC7O00311 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.15□□□□□ -1.91
CDC7O00311 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.15□□□□□ -1.91
CDC7O00311 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.15□□□□□ -1.91
CDC7O00311 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDC7O00311 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.15□□□□□ -1.91
CDC7O00311 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.15□□□□□ -1.91
CDC7O00311 RNA5SP217-201ENST00000515959 91 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.15□□□□□ -1.91
CDC7O00311 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.15□□□□□ -1.91
CDC7O00311 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.15□□□□□ -1.91
CDC7O00311 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
CDC7O00311 MTCYBP41-201ENST00000528913 1123 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
CDC7O00311 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.15□□□□□ -1.91
CDC7O00311 NCAPGP2-201ENST00000557911 754 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.15□□□□□ -1.91
CDC7O00311 ELOCP35-201ENST00000604289 336 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AC018754.1-201ENST00000607486 925 ntBASIC3.15□□□□□ -1.91
CDC7O00311 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.15□□□□□ -1.91
CDC7O00311 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CDC7O00311 AL354976.1-201ENST00000613843 387 ntBASIC3.15□□□□□ -1.91
CDC7O00311 U73479.1-201ENST00000618062 168 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AC048347.1-201ENST00000624621 427 ntBASIC3.15□□□□□ -1.91
CDC7O00311 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.15□□□□□ -1.91
CDC7O00311 U6.105-201ENST00000637379 88 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.91
CDC7O00311 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDC7O00311 MTND5P24-201ENST00000438892 1767 ntBASIC3.15□□□□□ -1.91
CDC7O00311 AC073346.2-201ENST00000624724 2058 ntBASIC3.15□□□□□ -1.91
CDC7O00311 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDC7O00311 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.14□□□□□ -1.91
CDC7O00311 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDC7O00311 MAPK10-362ENST00000641864 4484 ntBASIC3.14□□□□□ -1.91
CDC7O00311 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDC7O00311 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDC7O00311 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDC7O00311 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDC7O00311 RNU6-600P-201ENST00000362524 99 ntBASIC3.14□□□□□ -1.91
CDC7O00311 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDC7O00311 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDC7O00311 MIR183-201ENST00000384958 110 ntBASIC3.14□□□□□ -1.91
CDC7O00311 MIR607-201ENST00000385241 96 ntBASIC3.14□□□□□ -1.91
CDC7O00311 SNORD65C-201ENST00000390962 71 ntBASIC3.14□□□□□ -1.91
CDC7O00311 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDC7O00311 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.14□□□□□ -1.91
CDC7O00311 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.14□□□□□ -1.91
CDC7O00311 EI24P1-201ENST00000416584 867 ntBASIC3.14□□□□□ -1.91
CDC7O00311 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.14□□□□□ -1.91
CDC7O00311 AC114973.1-201ENST00000429057 632 ntBASIC3.14□□□□□ -1.91
CDC7O00311 AC097713.2-201ENST00000430199 356 ntBASIC3.14□□□□□ -1.91
CDC7O00311 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms