Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
COL6A5A8TX70 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2□□□□□ -2.09
COL6A5A8TX70 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
COL6A5A8TX70 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2□□□□□ -2.09
COL6A5A8TX70 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL6A5A8TX70 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
COL6A5A8TX70 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
COL6A5A8TX70 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2□□□□□ -2.09
COL6A5A8TX70 MIR93-201ENST00000385024 80 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 NPM1P10-201ENST00000398310 865 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 BTF3P7-201ENST00000407097 488 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 RN7SKP32-201ENST00000410167 303 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 UBE2V1P6-201ENST00000430840 422 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 FGF7P3-201ENST00000454645 303 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 MTCO3P11-201ENST00000455103 774 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 VWA8P1-201ENST00000510889 176 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 NPM1P35-201ENST00000533043 868 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 MIR6873-201ENST00000622788 63 ntBASIC2□□□□□ -2.09
COL6A5A8TX70 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.99□□□□□ -2.09
COL6A5A8TX70 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
COL6A5A8TX70 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A5A8TX70 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A5A8TX70 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A5A8TX70 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A5A8TX70 Y_RNA.30-201ENST00000362572 97 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-1-201ENST00000383898 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-42P-201ENST00000384165 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-36P-201ENST00000384172 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-4P-201ENST00000384205 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-5P-201ENST00000384238 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-3P-201ENST00000384314 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-2-201ENST00000384627 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-9-201ENST00000384776 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-33P-201ENST00000384793 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 AC245291.1-201ENST00000419501 328 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 AC093151.1-201ENST00000427711 313 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 AC112220.1-201ENST00000434628 355 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 HMGB3P11-201ENST00000440127 604 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 AC011816.1-201ENST00000441346 546 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 AC003982.1-202ENST00000469928 248 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 AP001086.1-201ENST00000494882 321 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
COL6A5A8TX70 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A5A8TX70 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNU6-6P-201ENST00000606623 107 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
COL6A5A8TX70 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A5A8TX70 Y_RNA.36-201ENST00000362602 112 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 Y_RNA.68-201ENST00000362881 102 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A5A8TX70 RNA5SP31-201ENST00000411144 127 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 YPEL5P1-201ENST00000419731 367 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 AC018630.1-201ENST00000541376 925 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 MTCYBP28-201ENST00000566728 1132 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.99□□□□□ -2.09
COL6A5A8TX70 AL008729.2-201ENST00000606393 473 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 snoU13.31-201ENST00000607291 104 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.99□□□□□ -2.09
COL6A5A8TX70 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.99□□□□□ -2.09
COL6A5A8TX70 AC110994.2-201ENST00000635481 492 ntBASIC1.99□□□□□ -2.09
COL6A5A8TX70 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A5A8TX70 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A5A8TX70 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC1.98□□□□□ -2.09
COL6A5A8TX70 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.98□□□□□ -2.09
COL6A5A8TX70 RPL29P29-201ENST00000448725 423 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 AP000893.1-201ENST00000474462 794 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 PROS2P-201ENST00000474651 1951 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 HNRNPKP5-201ENST00000515300 253 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 RNA5SP476-201ENST00000516613 103 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 OOSP1P2-201ENST00000579644 351 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 MIR3605-201ENST00000583214 100 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.98□□□□□ -2.09
COL6A5A8TX70 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 FGF7P8-201ENST00000402994 292 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 RNA5SP39-201ENST00000411245 120 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.98□□□□□ -2.09
COL6A5A8TX70 RPL7P37-201ENST00000425095 738 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.98□□□□□ -2.09
COL6A5A8TX70 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.98□□□□□ -2.09
COL6A5A8TX70 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC1.98□□□□□ -2.09
COL6A5A8TX70 OR1AB1P-201ENST00000585564 761 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.6-201ENST00000603753 252 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.11-201ENST00000604059 253 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.10-201ENST00000604330 253 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AC008162.1-201ENST00000604718 254 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.1-201ENST00000604752 252 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.2-201ENST00000604983 252 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AC008277.2-201ENST00000605196 797 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.5-201ENST00000605253 252 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.4-201ENST00000605279 254 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.12-201ENST00000605291 253 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.8-201ENST00000605353 252 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms