Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC087499.2-201ENST00000432861 149 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AL671855.1-201ENST00000446875 1203 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 NUTF2P7-201ENST00000453086 375 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 ELOCP12-201ENST00000458706 328 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 VN1R17P-201ENST00000472048 1090 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC017015.1-201ENST00000477387 286 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC005912.1-201ENST00000495392 255 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 RNA5SP24-201ENST00000516478 95 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 RPPH1-2P-201ENST00000516688 293 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 RNU1-104P-201ENST00000517280 175 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 SOD1P3-201ENST00000518682 454 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 CKS1BP7-201ENST00000522230 235 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC121758.2-201ENST00000553271 193 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 BDH2P1-201ENST00000602288 736 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC006329.2-201ENST00000611491 394 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AL390240.1-201ENST00000612950 384 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC015967.1-201ENST00000619893 476 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC026422.1-201ENST00000623961 452 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 Z82209.1-201ENST00000422141 2135 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 MIR422A-201ENST00000362286 90 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 SNORA38.1-201ENST00000364172 131 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 SNORA51.11-201ENST00000384442 131 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC005300.1-201ENST00000428401 373 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC004263.1-201ENST00000479327 332 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 GTF2IP9-201ENST00000502460 301 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC103810.1-201ENST00000579873 453 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 ELOCP35-201ENST00000604289 336 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC073387.2-201ENST00000604797 784 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC012442.3-202ENST00000636742 206 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC016717.2-201ENST00000609089 5141 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 CKAP2P1-201ENST00000555477 2049 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 AC063923.1-201ENST00000478982 1619 ntBASIC1.72□□□□□ -2.13
LINC01549A6NIU2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01549A6NIU2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 OR56A5-201ENST00000340110 738 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 RNU2-25P-201ENST00000411041 191 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 EEF1A1P41-201ENST00000414667 207 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 MTND1P23-201ENST00000416931 372 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AL158156.1-201ENST00000422509 473 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 TRBV26-201ENST00000456572 344 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC104472.2-201ENST00000469035 601 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 RPL23AP45-201ENST00000476406 468 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 RPL21P103-201ENST00000479921 488 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC104435.1-201ENST00000483483 166 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC109486.1-201ENST00000486833 374 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 XKRY-201ENST00000510392 1100 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 RN7SKP157-201ENST00000516174 282 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC104115.2-201ENST00000523026 687 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 RPL23AP84-201ENST00000571193 464 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AP003117.2-201ENST00000606010 545 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC034102.8-201ENST00000615146 484 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC006065.5-201ENST00000623427 349 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC068724.3-201ENST00000625906 87 ntBASIC1.71□□□□□ -2.14
LINC01549A6NIU2 AC138915.1-201ENST00000565427 1685 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms