Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SPENQ96T58 SKINT1L-201ENST00000401057 817 ntBASIC2.19□□□□□ -2.06
SPENQ96T58 AC092045.1-201ENST00000495716 1231 ntBASIC2.19□□□□□ -2.06
SPENQ96T58 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.19□□□□□ -2.06
SPENQ96T58 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.19□□□□□ -2.06
SPENQ96T58 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
SPENQ96T58 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SPENQ96T58 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
SPENQ96T58 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
SPENQ96T58 AP003385.6-201ENST00000531603 374 ntBASIC2.19□□□□□ -2.06
SPENQ96T58 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.19□□□□□ -2.06
SPENQ96T58 AP000919.1-202ENST00000581139 1264 ntBASIC2.19□□□□□ -2.06
SPENQ96T58 AC104237.2-201ENST00000612456 443 ntBASIC2.19□□□□□ -2.06
SPENQ96T58 MTND5P28-201ENST00000438005 1594 ntBASIC2.19□□□□□ -2.06
SPENQ96T58 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SPENQ96T58 NPM1P10-201ENST00000398310 865 ntBASIC2.19□□□□□ -2.06
SPENQ96T58 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.19□□□□□ -2.06
SPENQ96T58 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.19□□□□□ -2.06
SPENQ96T58 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.19□□□□□ -2.06
SPENQ96T58 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.19□□□□□ -2.06
SPENQ96T58 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SPENQ96T58 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.19□□□□□ -2.06
SPENQ96T58 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPENQ96T58 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPENQ96T58 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPENQ96T58 AC027514.1-201ENST00000588561 1603 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.18□□□□□ -2.06
SPENQ96T58 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SPENQ96T58 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.18□□□□□ -2.06
SPENQ96T58 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.18□□□□□ -2.06
SPENQ96T58 FAM92A1P2-202ENST00000504766 877 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 NDUFA5P6-201ENST00000542110 379 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 AC023813.4-201ENST00000607580 580 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SPENQ96T58 OR11H5P-202ENST00000641612 1325 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPENQ96T58 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPENQ96T58 AL591416.1-201ENST00000404015 867 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 RPL23AP16-201ENST00000441715 421 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 AL592437.1-201ENST00000443781 492 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 SNORA64.4-201ENST00000516632 81 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 OR8L1P-201ENST00000534005 955 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.18□□□□□ -2.06
SPENQ96T58 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SPENQ96T58 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.18□□□□□ -2.06
SPENQ96T58 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.18□□□□□ -2.06
SPENQ96T58 NANOGP5-201ENST00000424456 877 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 AC006539.3-201ENST00000454258 129 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.18□□□□□ -2.06
SPENQ96T58 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.18□□□□□ -2.06
SPENQ96T58 MIR1291-201ENST00000627649 87 ntBASIC2.18□□□□□ -2.06
SPENQ96T58 AP000526.1-201ENST00000603308 1388 ntBASIC2.17□□□□□ -2.06
SPENQ96T58 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SPENQ96T58 AC107027.3-201ENST00000565095 3473 ntBASIC2.17□□□□□ -2.06
SPENQ96T58 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SPENQ96T58 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.17□□□□□ -2.06
SPENQ96T58 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SPENQ96T58 RNU1-75P-201ENST00000347264 129 ntBASIC2.17□□□□□ -2.06
SPENQ96T58 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.17□□□□□ -2.06
SPENQ96T58 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.17□□□□□ -2.06
SPENQ96T58 AP001521.1-201ENST00000609150 300 ntBASIC2.17□□□□□ -2.06
SPENQ96T58 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.17□□□□□ -2.06
SPENQ96T58 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
SPENQ96T58 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SPENQ96T58 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.17□□□□□ -2.06
SPENQ96T58 AL353729.1-201ENST00000425044 720 ntBASIC2.17□□□□□ -2.06
SPENQ96T58 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.17□□□□□ -2.06
SPENQ96T58 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.17□□□□□ -2.06
SPENQ96T58 VN1R17P-201ENST00000472048 1090 ntBASIC2.17□□□□□ -2.06
SPENQ96T58 AP000790.1-201ENST00000528891 737 ntBASIC2.17□□□□□ -2.06
SPENQ96T58 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SPENQ96T58 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SPENQ96T58 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
SPENQ96T58 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.17□□□□□ -2.06
SPENQ96T58 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPENQ96T58 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SPENQ96T58 AC096725.1-201ENST00000514266 313 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 MIR449C-201ENST00000516047 92 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
SPENQ96T58 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SPENQ96T58 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SPENQ96T58 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPENQ96T58 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SPENQ96T58 BX005019.1-201ENST00000561881 1810 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 RNU1-17P-201ENST00000363022 152 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 MIR181B1-201ENST00000385240 110 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 AC080125.1-201ENST00000414888 684 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.16□□□□□ -2.06
SPENQ96T58 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.16□□□□□ -2.06
SPENQ96T58 AC122134.1-201ENST00000565664 1104 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 AL583832.1-201ENST00000603227 784 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 AC103710.2-201ENST00000609912 942 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 AC004825.2-201ENST00000616634 455 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 U4.3-201ENST00000621047 82 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 MIR6873-201ENST00000622788 63 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 AL353743.4-201ENST00000422653 1547 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 Y_RNA.122-201ENST00000363331 96 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 RPS15AP28-201ENST00000435088 386 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 AC020895.1-201ENST00000595362 272 ntBASIC2.16□□□□□ -2.06
SPENQ96T58 AC008121.2-201ENST00000614647 523 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms