Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-596P-201ENST00000365395 98 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 RNU6-47P-201ENST00000383866 107 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 RNU6-708P-201ENST00000384217 107 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 RNU6-417P-201ENST00000384712 107 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 AC005042.1-201ENST00000393397 800 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 Y_RNA.629-201ENST00000411368 105 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 RPL36P19-201ENST00000430744 301 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.7□□□□□ -1.34
LRCH3Q96II8 FTLP8-201ENST00000446770 267 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 AC018437.1-201ENST00000492214 406 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 AC022206.1-201ENST00000495947 347 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.7□□□□□ -1.34
LRCH3Q96II8 AC108471.1-201ENST00000513977 287 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 Y_RNA.662-201ENST00000516028 97 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 AP004607.2-201ENST00000533949 322 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 AC126177.3-201ENST00000551839 688 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 MIR4293-201ENST00000584305 78 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 AC072026.1-201ENST00000605023 201 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LRCH3Q96II8 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LRCH3Q96II8 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.7□□□□□ -1.34
LRCH3Q96II8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LRCH3Q96II8 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
LRCH3Q96II8 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.7□□□□□ -1.34
LRCH3Q96II8 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 AC138393.1-203ENST00000327086 343 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 RNA5SP156-201ENST00000410250 110 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 RNA5SP107-201ENST00000411358 122 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 BMS1P17-202ENST00000416720 316 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AL354766.1-201ENST00000423396 542 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AL662874.1-201ENST00000426065 230 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 AC073410.1-201ENST00000435125 589 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 RPL35AP22-201ENST00000436855 335 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 CEACAMP9-201ENST00000442990 513 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 PLGLA-201ENST00000465668 449 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AL122020.1-201ENST00000472287 459 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 RPL7AP6-201ENST00000477943 801 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AC068522.1-201ENST00000482895 345 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AC090958.1-201ENST00000511122 351 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 RNU6-911P-201ENST00000516523 104 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 SCARNA24.2-201ENST00000516968 130 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 AL359219.2-201ENST00000555184 348 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AC024614.2-201ENST00000577584 372 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 VN1R84P-201ENST00000593697 235 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AL161616.1-201ENST00000611867 286 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AC131009.3-201ENST00000621809 287 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 AP000346.3-201ENST00000622821 210 ntBASIC6.69□□□□□ -1.34
LRCH3Q96II8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.69□□□□□ -1.34
LRCH3Q96II8 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LRCH3Q96II8 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 AL445437.1-201ENST00000623157 3087 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 EXOC5P1-201ENST00000510543 1969 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 AC022905.1-201ENST00000503430 3048 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 Y_RNA.76-201ENST00000362931 109 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 RNU6-1168P-201ENST00000390831 104 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 SNORD115-46-201ENST00000390982 71 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms