Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MIR4506-201ENST00000584693 77 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AL669831.4-202ENST00000590817 238 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC096947.1-201ENST00000603233 470 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC135178.6-201ENST00000605314 398 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CLHC1Q8NHS4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 MTND5P24-201ENST00000438892 1767 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 RNA5SP50-201ENST00000363731 107 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 SNORA27.3-201ENST00000364937 134 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 MIR200C-201ENST00000384980 68 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 ATG3P1-201ENST00000419507 911 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 USP9YP36-201ENST00000424581 829 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 AC044797.1-201ENST00000445744 679 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 SNORA84-201ENST00000459229 133 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 HAUS1P3-201ENST00000523909 662 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 AC018618.2-201ENST00000604770 446 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 AC245389.1-201ENST00000605141 529 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 U3.45-201ENST00000607547 219 ntBASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.08□□□□□ -1.92
CLHC1Q8NHS4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 PTMAP2-201ENST00000397627 327 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 SSXP10-201ENST00000402595 565 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC007899.1-201ENST00000412776 775 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 SDCBPP3-201ENST00000419629 891 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC073508.1-201ENST00000428866 656 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC009969.1-201ENST00000438726 172 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC004865.1-201ENST00000442276 1003 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 RPL21P13-201ENST00000488305 481 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 RNU6-56P-201ENST00000516986 93 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AP000619.3-201ENST00000535634 1127 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 ZNF415P1-201ENST00000582279 1166 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 MIR92B-201ENST00000607575 96 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 CR589904.2-201ENST00000612533 440 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AL157817.1-201ENST00000614264 790 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC231759.1-201ENST00000616455 597 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC006249.1-201ENST00000621223 471 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AC095031.1-201ENST00000623685 672 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AP000676.4-201ENST00000624659 623 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 U6.107-201ENST00000637108 79 ntBASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.07□□□□□ -1.92
CLHC1Q8NHS4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 HMGN1P24-201ENST00000412282 298 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 OR1AA1P-201ENST00000419597 916 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 RPL21P10-201ENST00000463521 490 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 AC008155.2-201ENST00000464337 397 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 RN7SL283P-201ENST00000489055 303 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 RNU6-551P-201ENST00000516661 103 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 AL121603.1-201ENST00000553815 142 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 RPL21P12-201ENST00000559810 515 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 MAGOH2P-202ENST00000584384 429 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms