Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AL645568.3-201ENST00000433683 316 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AL645939.3-201ENST00000435408 225 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC083855.1-201ENST00000440041 258 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AP000281.1-201ENST00000444036 316 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 GSTA11P-201ENST00000452866 669 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC002553.2-201ENST00000453217 340 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 RPL37P6-202ENST00000464216 403 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 RN7SL83P-201ENST00000468131 297 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 RPL21P103-201ENST00000479921 488 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 HMGB1P30-201ENST00000492455 606 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 Y_RNA.689-201ENST00000516589 107 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-699P-201ENST00000517081 110 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 RN7SKP234-201ENST00000517173 224 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 SNORD116.3-201ENST00000517176 78 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC004696.1-201ENST00000614345 607 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC020656.2-201ENST00000613291 5309 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC109446.4-201ENST00000623235 2755 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC005592.1-201ENST00000566527 1640 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AL121839.2-201ENST00000565058 6943 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MIR135A2-201ENST00000384854 100 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-817P-201ENST00000391083 104 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC113412.1-201ENST00000425840 504 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AL121871.1-201ENST00000443413 436 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MRPL48P1-201ENST00000445390 636 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC092967.1-201ENST00000449016 481 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 CECR9-201ENST00000453421 199 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 snoU13.29-201ENST00000459370 104 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 RPL37P6-201ENST00000460682 294 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 CEACAMP10-202ENST00000495431 496 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC022206.1-201ENST00000495947 347 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 RN7SKP60-201ENST00000516985 239 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC009812.2-201ENST00000517657 457 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 RPA2P3-201ENST00000533268 770 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MYL12BP1-201ENST00000569826 507 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC113195.1-201ENST00000579952 141 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AL591167.1-201ENST00000607321 456 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 HSPA8P4-201ENST00000511877 1920 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 AL158163.1-201ENST00000603915 1649 ntBASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.85□□□□□ -1.47
DEPDC4Q8N2C3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 RNA5SP321-201ENST00000362722 111 ntBASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.84□□□□□ -1.47
DEPDC4Q8N2C3 SET-203ENST00000372688 801 ntTSL 2 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms