Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC104057.1-201ENST00000515547 497 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 RNU2-27P-201ENST00000516185 142 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AP001317.1-201ENST00000531194 960 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AL139174.1-201ENST00000531489 886 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 PDCL2P2-201ENST00000533651 189 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC007458.1-201ENST00000542812 373 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 CENPUP2-201ENST00000555897 1186 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC008739.3-201ENST00000603262 127 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC092354.2-201ENST00000607786 514 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 MIR6075-201ENST00000620782 95 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC068647.1-201ENST00000489539 2265 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL355578.1-201ENST00000607405 1328 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 Z99496.1-201ENST00000469424 1477 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC117529.2-201ENST00000512159 2068 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-1066P-201ENST00000363573 105 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 U3.15-201ENST00000365398 212 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 Y_RNA.472-201ENST00000384322 102 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 MIR649-201ENST00000384843 97 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 SNORD17-201ENST00000390930 237 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 SSXP10-201ENST00000402595 565 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC093578.1-201ENST00000415219 368 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 BOLA3P4-201ENST00000418151 400 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC002075.2-201ENST00000425207 252 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC005345.1-201ENST00000431868 217 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL050321.1-201ENST00000432363 400 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 OR10R1P-201ENST00000441524 1141 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL645939.1-201ENST00000453429 797 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 DUXAP8-207ENST00000456786 622 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL049830.2-201ENST00000480072 201 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 RN7SL293P-201ENST00000481765 281 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 GTF2IP9-201ENST00000502460 301 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 RNF138P1-201ENST00000502765 546 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 HIGD1AP3-201ENST00000515857 278 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-415P-201ENST00000516252 97 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 ARL2BPP5-201ENST00000523141 481 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AP000790.1-201ENST00000528891 737 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 OR8L1P-201ENST00000534005 955 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC026333.2-201ENST00000542164 106 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 DUXAP6-201ENST00000553858 601 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 MIR3912-201ENST00000577566 105 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 SNORD39.3-201ENST00000584451 71 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC007566.2-201ENST00000603642 413 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL365503.1-201ENST00000605247 905 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AP000240.1-201ENST00000609910 452 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 DUXAP10-204ENST00000612052 616 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL138478.1-201ENST00000612252 832 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AL121895.2-201ENST00000619558 447 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 MFSD8-233ENST00000641482 4860 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AP005901.5-201ENST00000545779 1796 ntBASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf40Q8IXQ3 AC058791.1-201ENST00000608412 3198 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 AL136964.1-201ENST00000622038 2990 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 snoZ40.1-201ENST00000364540 72 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-356P-201ENST00000384140 107 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 MIR490-201ENST00000384865 128 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 SNORD65.1-201ENST00000390889 71 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-1300P-201ENST00000391046 108 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-584P-201ENST00000410350 95 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 AC068533.1-201ENST00000418542 415 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 AC114973.1-201ENST00000429057 632 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 SEPT7P5-201ENST00000434048 306 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 GTF2IP7-202ENST00000436677 309 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 AC093155.1-201ENST00000440164 826 ntBASIC3.22□□□□□ -1.89
C9orf40Q8IXQ3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms