Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AL022578.1-201ENST00000439330 1433 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 AL136164.3-201ENST00000624429 3978 ntBASIC4.71□□□□□ -1.66
SLC44A4Q53GD3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 RNA5SP366-201ENST00000365454 123 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 RNA5SP372-201ENST00000390836 115 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC109780.2-201ENST00000413467 845 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 OR2B8P-201ENST00000432841 938 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 Z74696.2-201ENST00000436514 498 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 LSM1P1-201ENST00000438629 273 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC092641.1-201ENST00000440229 772 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 RPL23AP93-201ENST00000440847 484 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 USP9YP29-201ENST00000445112 563 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 PHBP16-201ENST00000446318 950 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 HMGB3P21-201ENST00000452483 547 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 RPL5P32-201ENST00000454085 879 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 RN7SL98P-201ENST00000462271 300 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 RPL37P6-202ENST00000464216 403 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC017015.1-201ENST00000477387 286 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 RPL9P33-201ENST00000484311 566 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC025164.1-201ENST00000496249 478 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AP003730.1-201ENST00000524605 285 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 HSPE1P3-201ENST00000559254 309 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 BNIP3P23-201ENST00000599655 511 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 YWHAQP7-201ENST00000603536 658 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC138749.5-201ENST00000611461 208 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 Z99129.1-201ENST00000612510 255 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC025594.3-201ENST00000613068 790 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 MIR3653-201ENST00000625572 110 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 AC099654.13-201ENST00000639774 207 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 GDI2P1-201ENST00000429312 1336 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A4Q53GD3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 MFSD8-242ENST00000641690 4199 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 ERCC6-202ENST00000374127 1782 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 RN7SKP280-201ENST00000364196 304 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 RNU6-867P-201ENST00000364956 107 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 RNY3P10-201ENST00000384764 102 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 RNU6-952P-201ENST00000391164 108 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AL024474.1-201ENST00000404655 591 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 RPL23AP48-201ENST00000406913 488 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AL389915.1-201ENST00000422463 466 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AL512649.1-201ENST00000428997 581 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 MRPS10P2-201ENST00000431226 381 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 Z95327.1-201ENST00000446082 482 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 PLGLA-201ENST00000465668 449 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 CDC42P4-201ENST00000510507 563 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 SAP18P1-201ENST00000512058 390 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 MTND5P4-201ENST00000514978 288 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC013828.2-201ENST00000532487 235 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms