Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABPAQ06546 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
GABPAQ06546 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
GABPAQ06546 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
GABPAQ06546 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GABPAQ06546 MIR16-1-201ENST00000385271 89 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 NDUFB4P4-201ENST00000404822 243 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 RNU2-21P-201ENST00000410368 188 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 AL356968.1-201ENST00000416622 474 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AL354692.1-201ENST00000423044 315 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 RPL36P19-201ENST00000430744 301 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 AC010881.1-201ENST00000433830 235 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABPAQ06546 AL671855.1-201ENST00000446875 1203 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.83□□□□□ -1.8
GABPAQ06546 AC244505.3-201ENST00000454598 187 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 RPL37P6-202ENST00000464216 403 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 S100A11P2-201ENST00000467589 312 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC011352.3-201ENST00000505162 593 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 AC118282.2-201ENST00000508739 374 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.83□□□□□ -1.8
GABPAQ06546 AC010374.2-201ENST00000512933 535 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.83□□□□□ -1.8
GABPAQ06546 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.83□□□□□ -1.8
GABPAQ06546 CBX3P5-201ENST00000552017 521 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.83□□□□□ -1.8
GABPAQ06546 MIR4504-201ENST00000577413 92 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC090330.1-201ENST00000588646 764 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 VN1R79P-201ENST00000593540 513 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.83□□□□□ -1.8
GABPAQ06546 AL139022.2-201ENST00000606934 443 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC097504.2-201ENST00000608088 454 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC100793.4-201ENST00000613683 429 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AL157817.1-201ENST00000614264 790 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC138932.5-201ENST00000617759 563 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC022306.3-201ENST00000619930 550 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 AC111188.2-201ENST00000529697 1387 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABPAQ06546 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABPAQ06546 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
GABPAQ06546 AC107081.3-201ENST00000612715 2034 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
GABPAQ06546 AC008725.1-201ENST00000605123 2263 ntBASIC3.83□□□□□ -1.8
GABPAQ06546 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABPAQ06546 AL355596.1-201ENST00000565399 3996 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
GABPAQ06546 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.82□□□□□ -1.8
GABPAQ06546 SNORA7.4-201ENST00000384249 137 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GABPAQ06546 RPS12P23-201ENST00000419579 400 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 SFR1P2-201ENST00000421841 730 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 AL353678.1-201ENST00000422735 741 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.82□□□□□ -1.8
GABPAQ06546 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.82□□□□□ -1.8
GABPAQ06546 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.82□□□□□ -1.8
GABPAQ06546 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.82□□□□□ -1.8
GABPAQ06546 ELOCP23-201ENST00000452014 332 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.82□□□□□ -1.8
GABPAQ06546 FCF1P6-201ENST00000456841 595 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 AP001992.1-205ENST00000462248 379 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 RN7SL863P-201ENST00000462370 296 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 AC104982.1-201ENST00000478775 574 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 AC008837.1-201ENST00000511513 412 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 AC109471.1-201ENST00000511631 612 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 snoZ278.1-201ENST00000517059 112 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 IGHV3-32-201ENST00000519182 355 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.82□□□□□ -1.8
GABPAQ06546 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.82□□□□□ -1.8
GABPAQ06546 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.82□□□□□ -1.8
GABPAQ06546 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.82□□□□□ -1.8
GABPAQ06546 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.82□□□□□ -1.8
GABPAQ06546 RFPL1S-203ENST00000539579 330 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.82□□□□□ -1.8
GABPAQ06546 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GABPAQ06546 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.82□□□□□ -1.8
GABPAQ06546 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GABPAQ06546 AP003117.2-201ENST00000606010 545 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 AC099654.8-201ENST00000637757 681 ntBASIC3.82□□□□□ -1.8
GABPAQ06546 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GABPAQ06546 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
GABPAQ06546 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GABPAQ06546 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.81□□□□□ -1.8
GABPAQ06546 XIAPP3-201ENST00000312918 795 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 RNU6-236P-201ENST00000363886 106 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 MTCO2P31-201ENST00000402702 684 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 BTBD10P2-201ENST00000404779 676 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AC096664.2-201ENST00000411843 406 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AMD1P2-201ENST00000412936 992 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 HSFY1P1-201ENST00000423928 1178 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms