Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.75□□□□□ -1.97
GTF2A1P52655 AC108734.1-201ENST00000439549 399 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.75□□□□□ -1.97
GTF2A1P52655 TPMTP4-201ENST00000450749 678 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.75□□□□□ -1.97
GTF2A1P52655 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.75□□□□□ -1.97
GTF2A1P52655 MRPL42P6-201ENST00000486397 371 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 SRIP1-201ENST00000489235 288 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 AL024509.2-201ENST00000493462 493 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 MTND3P24-201ENST00000506306 329 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.75□□□□□ -1.97
GTF2A1P52655 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.75□□□□□ -1.97
GTF2A1P52655 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.75□□□□□ -1.97
GTF2A1P52655 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.75□□□□□ -1.97
GTF2A1P52655 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.75□□□□□ -1.97
GTF2A1P52655 AC136624.4-201ENST00000573044 370 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 AC115085.1-201ENST00000588924 229 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 AC005046.1-201ENST00000608515 625 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 MIR6748-201ENST00000610433 71 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 CR381653.2-201ENST00000624041 768 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 AC068724.3-201ENST00000625906 87 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 AC005336.3-201ENST00000623833 2679 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.74□□□□□ -1.97
GTF2A1P52655 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
GTF2A1P52655 FRG1BP-201ENST00000278882 761 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 RNA5SP515-201ENST00000364570 118 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 MIR218-2-201ENST00000385006 110 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.74□□□□□ -1.97
GTF2A1P52655 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.74□□□□□ -1.97
GTF2A1P52655 AL035246.1-201ENST00000433554 1255 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.74□□□□□ -1.97
GTF2A1P52655 PRDX3P4-201ENST00000470828 747 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 RPS29P2-201ENST00000479278 136 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 HMGN1P15-201ENST00000513870 295 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.74□□□□□ -1.97
GTF2A1P52655 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.74□□□□□ -1.97
GTF2A1P52655 AC008083.2-201ENST00000546707 476 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.74□□□□□ -1.97
GTF2A1P52655 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.74□□□□□ -1.97
GTF2A1P52655 SS18L2P2-201ENST00000583960 235 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 CCDC58P3-201ENST00000590792 430 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.74□□□□□ -1.97
GTF2A1P52655 AC008962.1-201ENST00000605729 304 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 AC015849.2-201ENST00000605738 409 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.74□□□□□ -1.97
GTF2A1P52655 AL355493.4-201ENST00000618530 292 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 AL034408.1-202ENST00000636088 415 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 AC012321.1-201ENST00000561622 1588 ntBASIC2.74□□□□□ -1.97
GTF2A1P52655 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
GTF2A1P52655 RNA5SP391-201ENST00000363456 119 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
GTF2A1P52655 MIR627-201ENST00000384979 97 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 SNORA57.1-201ENST00000391227 145 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 U3.37-201ENST00000408528 213 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 RN7SKP159-201ENST00000410657 292 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 CYCSP19-201ENST00000411715 316 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 AF274854.1-201ENST00000413236 615 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 MTND1P23-201ENST00000416931 372 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 USP9YP27-201ENST00000418455 438 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 TOMM22P1-201ENST00000418578 312 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.73□□□□□ -1.97
GTF2A1P52655 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.73□□□□□ -1.97
GTF2A1P52655 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.73□□□□□ -1.97
GTF2A1P52655 TRGV7-201ENST00000427089 353 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 AC073508.1-201ENST00000428866 656 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
GTF2A1P52655 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.73□□□□□ -1.97
GTF2A1P52655 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.73□□□□□ -1.97
GTF2A1P52655 MTCYBP29-201ENST00000436327 1006 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 CDC27P1-201ENST00000445384 715 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 Z99714.1-201ENST00000450463 807 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 AC111000.5-201ENST00000506559 1178 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.73□□□□□ -1.97
GTF2A1P52655 MTND4LP31-201ENST00000514859 294 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 AC007458.1-201ENST00000542812 373 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.73□□□□□ -1.97
GTF2A1P52655 MIR5694-201ENST00000581190 76 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 MIR3605-201ENST00000583214 100 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.73□□□□□ -1.97
GTF2A1P52655 AC010620.2-201ENST00000600135 313 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 VN1R85P-201ENST00000601587 426 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 RPL23AP92-201ENST00000603609 255 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 PRELID3BP8-201ENST00000604148 295 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 AL137843.1-201ENST00000605078 385 ntBASIC2.73□□□□□ -1.97
GTF2A1P52655 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
GTF2A1P52655 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
GTF2A1P52655 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
GTF2A1P52655 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
GTF2A1P52655 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
GTF2A1P52655 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
GTF2A1P52655 OR1S2-201ENST00000302592 978 ntBASIC2.72□□□□□ -1.97
GTF2A1P52655 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
GTF2A1P52655 RNU6-666P-201ENST00000363499 107 ntBASIC2.72□□□□□ -1.97
GTF2A1P52655 DHFRP5-201ENST00000406944 564 ntBASIC2.72□□□□□ -1.97
GTF2A1P52655 U3.42-201ENST00000408746 214 ntBASIC2.72□□□□□ -1.97
GTF2A1P52655 RN7SKP263-201ENST00000411194 309 ntBASIC2.72□□□□□ -1.97
GTF2A1P52655 MORF4L1P6-201ENST00000418771 268 ntBASIC2.72□□□□□ -1.97
GTF2A1P52655 MORF4L1P7-201ENST00000426038 703 ntBASIC2.72□□□□□ -1.97
GTF2A1P52655 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.72□□□□□ -1.97
GTF2A1P52655 AL031659.1-201ENST00000447075 539 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms