Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
BDNFP23560 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
BDNFP23560 LINC00561-201ENST00000565815 2738 ntBASIC4.26□□□□□ -1.73
BDNFP23560 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.26□□□□□ -1.73
BDNFP23560 RNU1-64P-201ENST00000365443 163 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AC025750.1-201ENST00000399891 379 ntBASIC4.26□□□□□ -1.73
BDNFP23560 FAT1P1-201ENST00000406588 507 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.26□□□□□ -1.73
BDNFP23560 RPL7P2-201ENST00000427639 268 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.26□□□□□ -1.73
BDNFP23560 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.26□□□□□ -1.73
BDNFP23560 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.26□□□□□ -1.73
BDNFP23560 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.26□□□□□ -1.73
BDNFP23560 PTGES3P5-201ENST00000455109 434 ntBASIC4.26□□□□□ -1.73
BDNFP23560 FCF1P6-201ENST00000456841 595 ntBASIC4.26□□□□□ -1.73
BDNFP23560 U3.44-201ENST00000458938 192 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AP001992.1-205ENST00000462248 379 ntBASIC4.26□□□□□ -1.73
BDNFP23560 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
BDNFP23560 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.26□□□□□ -1.73
BDNFP23560 SNORA19.3-201ENST00000516165 130 ntBASIC4.26□□□□□ -1.73
BDNFP23560 IFITM8P-201ENST00000522529 394 ntBASIC4.26□□□□□ -1.73
BDNFP23560 MTND1P6-201ENST00000523621 946 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.26□□□□□ -1.73
BDNFP23560 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.26□□□□□ -1.73
BDNFP23560 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.26□□□□□ -1.73
BDNFP23560 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.26□□□□□ -1.73
BDNFP23560 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BDNFP23560 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.26□□□□□ -1.73
BDNFP23560 CYP4A43P-201ENST00000568156 121 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AC079171.1-201ENST00000568788 914 ntBASIC4.26□□□□□ -1.73
BDNFP23560 MTND3P13-201ENST00000574391 343 ntBASIC4.26□□□□□ -1.73
BDNFP23560 TMF1P1-201ENST00000576058 373 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AC090615.1-201ENST00000577519 154 ntBASIC4.26□□□□□ -1.73
BDNFP23560 RN7SL703P-201ENST00000578485 302 ntBASIC4.26□□□□□ -1.73
BDNFP23560 COX6CP3-201ENST00000580869 223 ntBASIC4.26□□□□□ -1.73
BDNFP23560 DUXAP11-201ENST00000603858 526 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AC009220.3-201ENST00000604318 586 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AL022099.1-201ENST00000604551 712 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.26□□□□□ -1.73
BDNFP23560 DUXAP10-204ENST00000612052 616 ntBASIC4.26□□□□□ -1.73
BDNFP23560 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.26□□□□□ -1.73
BDNFP23560 AL353748.2-201ENST00000622148 471 ntBASIC4.26□□□□□ -1.73
BDNFP23560 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
BDNFP23560 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BDNFP23560 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
BDNFP23560 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.26□□□□□ -1.73
BDNFP23560 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
BDNFP23560 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
BDNFP23560 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.25□□□□□ -1.73
BDNFP23560 LINC02471-203ENST00000641941 4752 ntBASIC4.25□□□□□ -1.73
BDNFP23560 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AL390862.1-201ENST00000635467 1469 ntBASIC4.25□□□□□ -1.73
BDNFP23560 TAB3P1-202ENST00000452645 1634 ntBASIC4.25□□□□□ -1.73
BDNFP23560 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.25□□□□□ -1.73
BDNFP23560 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BDNFP23560 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BDNFP23560 MIR513A2-201ENST00000385249 127 ntBASIC4.25□□□□□ -1.73
BDNFP23560 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BDNFP23560 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.25□□□□□ -1.73
BDNFP23560 AL450338.1-201ENST00000407987 512 ntBASIC4.25□□□□□ -1.73
BDNFP23560 RNA5SP39-201ENST00000411245 120 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AC109780.2-201ENST00000413467 845 ntBASIC4.25□□□□□ -1.73
BDNFP23560 CCDC58P2-201ENST00000417131 366 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AC079780.1-201ENST00000428259 207 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AL590233.1-201ENST00000430017 456 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AL050321.1-201ENST00000432363 400 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AC122718.1-201ENST00000439448 744 ntBASIC4.25□□□□□ -1.73
BDNFP23560 RPS29P7-201ENST00000439662 171 ntBASIC4.25□□□□□ -1.73
BDNFP23560 ARPC3P5-201ENST00000448802 534 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AL451050.1-201ENST00000450126 415 ntBASIC4.25□□□□□ -1.73
BDNFP23560 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.25□□□□□ -1.73
BDNFP23560 FAM133DP-201ENST00000464802 691 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AC006517.1-201ENST00000480485 328 ntBASIC4.25□□□□□ -1.73
BDNFP23560 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BDNFP23560 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.25□□□□□ -1.73
BDNFP23560 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.25□□□□□ -1.73
BDNFP23560 RNU6-583P-201ENST00000516012 92 ntBASIC4.25□□□□□ -1.73
BDNFP23560 RN7SKP31-201ENST00000516354 278 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AC022690.1-201ENST00000526681 550 ntBASIC4.25□□□□□ -1.73
BDNFP23560 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.25□□□□□ -1.73
BDNFP23560 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.25□□□□□ -1.73
BDNFP23560 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
BDNFP23560 RN7SL339P-201ENST00000580597 296 ntBASIC4.25□□□□□ -1.73
BDNFP23560 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.25□□□□□ -1.73
BDNFP23560 AP002907.1-201ENST00000606361 1430 ntBASIC4.25□□□□□ -1.73
BDNFP23560 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.25□□□□□ -1.73
BDNFP23560 AL161637.1-201ENST00000622380 412 ntBASIC4.25□□□□□ -1.73
BDNFP23560 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
BDNFP23560 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BDNFP23560 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.25□□□□□ -1.73
BDNFP23560 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BDNFP23560 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.25□□□□□ -1.73
BDNFP23560 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
BDNFP23560 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BDNFP23560 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.25□□□□□ -1.73
BDNFP23560 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.24□□□□□ -1.73
BDNFP23560 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BDNFP23560 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.24□□□□□ -1.73
BDNFP23560 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms