Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
MSH3P20585 RNA5SP515-201ENST00000364570 118 ntBASIC3.84□□□□□ -1.79
MSH3P20585 SNORA57.1-201ENST00000391227 145 ntBASIC3.84□□□□□ -1.79
MSH3P20585 AL121978.1-201ENST00000402778 359 ntBASIC3.84□□□□□ -1.79
MSH3P20585 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.84□□□□□ -1.79
MSH3P20585 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.84□□□□□ -1.79
MSH3P20585 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH3P20585 AC234781.2-201ENST00000426370 994 ntBASIC3.84□□□□□ -1.79
MSH3P20585 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH3P20585 RSL24D1P3-201ENST00000449255 495 ntBASIC3.84□□□□□ -1.79
MSH3P20585 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.84□□□□□ -1.79
MSH3P20585 RNU7-125P-201ENST00000458760 62 ntBASIC3.84□□□□□ -1.79
MSH3P20585 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH3P20585 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.84□□□□□ -1.79
MSH3P20585 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.84□□□□□ -1.79
MSH3P20585 AC027309.2-201ENST00000520566 192 ntBASIC3.84□□□□□ -1.79
MSH3P20585 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH3P20585 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH3P20585 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.84□□□□□ -1.79
MSH3P20585 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH3P20585 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.84□□□□□ -1.79
MSH3P20585 EIF5A2P1-201ENST00000564027 460 ntBASIC3.84□□□□□ -1.79
MSH3P20585 AC009101.1-201ENST00000568135 242 ntBASIC3.84□□□□□ -1.79
MSH3P20585 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.84□□□□□ -1.79
MSH3P20585 AC010620.1-201ENST00000601088 1102 ntBASIC3.84□□□□□ -1.79
MSH3P20585 AC083899.3-201ENST00000603413 594 ntBASIC3.84□□□□□ -1.79
MSH3P20585 AC110741.2-201ENST00000605278 268 ntBASIC3.84□□□□□ -1.79
MSH3P20585 AC113194.1-201ENST00000606037 500 ntBASIC3.84□□□□□ -1.79
MSH3P20585 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.84□□□□□ -1.79
MSH3P20585 AC079248.2-201ENST00000623779 326 ntBASIC3.84□□□□□ -1.79
MSH3P20585 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.84□□□□□ -1.79
MSH3P20585 AC107982.1-201ENST00000507171 1300 ntBASIC3.84□□□□□ -1.79
MSH3P20585 MTND4P34-201ENST00000572715 1371 ntBASIC3.84□□□□□ -1.79
MSH3P20585 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.84□□□□□ -1.79
MSH3P20585 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
MSH3P20585 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.84□□□□□ -1.8
MSH3P20585 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
MSH3P20585 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
MSH3P20585 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
MSH3P20585 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.83□□□□□ -1.8
MSH3P20585 AC025125.1-201ENST00000624743 1922 ntBASIC3.83□□□□□ -1.8
MSH3P20585 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.83□□□□□ -1.8
MSH3P20585 XPOTP1-201ENST00000443317 2398 ntBASIC3.83□□□□□ -1.8
MSH3P20585 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MSH3P20585 AL391994.1-201ENST00000254724 282 ntBASIC3.83□□□□□ -1.8
MSH3P20585 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
MSH3P20585 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 RNU6-444P-201ENST00000383988 108 ntBASIC3.83□□□□□ -1.8
MSH3P20585 RNU6-1293P-201ENST00000384077 107 ntBASIC3.83□□□□□ -1.8
MSH3P20585 RNU6-1200P-201ENST00000384162 107 ntBASIC3.83□□□□□ -1.8
MSH3P20585 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.83□□□□□ -1.8
MSH3P20585 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.83□□□□□ -1.8
MSH3P20585 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 MTCO3P1-205ENST00000422088 832 ntBASIC3.83□□□□□ -1.8
MSH3P20585 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MSH3P20585 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 AL390023.1-201ENST00000428836 262 ntBASIC3.83□□□□□ -1.8
MSH3P20585 RPL31P54-201ENST00000429803 370 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AC005345.1-201ENST00000431868 217 ntBASIC3.83□□□□□ -1.8
MSH3P20585 B3GNT2P1-201ENST00000434960 952 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 YWHAZP8-201ENST00000436935 731 ntBASIC3.83□□□□□ -1.8
MSH3P20585 RPS29P7-201ENST00000439662 171 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.83□□□□□ -1.8
MSH3P20585 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.83□□□□□ -1.8
MSH3P20585 RPL21P133-201ENST00000443666 476 ntBASIC3.83□□□□□ -1.8
MSH3P20585 RPS17P13-201ENST00000448974 407 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.83□□□□□ -1.8
MSH3P20585 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 HMGN3P1-201ENST00000453847 193 ntBASIC3.83□□□□□ -1.8
MSH3P20585 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 RN7SL323P-201ENST00000494712 295 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AL139099.1-201ENST00000497398 403 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AC147055.4-201ENST00000504399 745 ntBASIC3.83□□□□□ -1.8
MSH3P20585 RPF2P2-201ENST00000504693 896 ntBASIC3.83□□□□□ -1.8
MSH3P20585 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.83□□□□□ -1.8
MSH3P20585 BTF3L4P4-201ENST00000506381 449 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.83□□□□□ -1.8
MSH3P20585 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 MTCO1P30-201ENST00000515244 580 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.83□□□□□ -1.8
MSH3P20585 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.83□□□□□ -1.8
MSH3P20585 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 AL356057.1-201ENST00000533798 831 ntBASIC3.83□□□□□ -1.8
MSH3P20585 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.83□□□□□ -1.8
MSH3P20585 UBE2NP1-201ENST00000545592 458 ntBASIC3.83□□□□□ -1.8
MSH3P20585 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.83□□□□□ -1.8
MSH3P20585 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 ISCA1P3-201ENST00000577104 373 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 AC090616.2-202ENST00000584248 222 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AC004223.2-201ENST00000590309 544 ntBASIC3.83□□□□□ -1.8
MSH3P20585 VN1R90P-201ENST00000595717 726 ntBASIC3.83□□□□□ -1.8
MSH3P20585 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 AC010680.4-201ENST00000605334 543 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AC080013.6-201ENST00000606185 215 ntBASIC3.83□□□□□ -1.8
MSH3P20585 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.83□□□□□ -1.8
MSH3P20585 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH3P20585 MIR6864-201ENST00000617935 70 ntBASIC3.83□□□□□ -1.8
MSH3P20585 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms