Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNA5SP76-201ENST00000516277 87 ntBASIC2.56□□□□□ -2
HMGA1P17096 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.56□□□□□ -2
HMGA1P17096 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.56□□□□□ -2
HMGA1P17096 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.56□□□□□ -2
HMGA1P17096 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.56□□□□□ -2
HMGA1P17096 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.56□□□□□ -2
HMGA1P17096 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.56□□□□□ -2
HMGA1P17096 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.56□□□□□ -2
HMGA1P17096 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.56□□□□□ -2
HMGA1P17096 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.56□□□□□ -2
HMGA1P17096 AC084035.1-201ENST00000634543 607 ntBASIC2.56□□□□□ -2
HMGA1P17096 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.56□□□□□ -2
HMGA1P17096 AC092326.2-201ENST00000624772 1561 ntBASIC2.56□□□□□ -2
HMGA1P17096 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.56□□□□□ -2
HMGA1P17096 AC016717.2-201ENST00000609089 5141 ntBASIC2.56□□□□□ -2
HMGA1P17096 AC006020.1-201ENST00000420179 1854 ntBASIC2.56□□□□□ -2
HMGA1P17096 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HMGA1P17096 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.55□□□□□ -2
HMGA1P17096 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.55□□□□□ -2
HMGA1P17096 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.55□□□□□ -2
HMGA1P17096 COX6CP2-201ENST00000444980 225 ntBASIC2.55□□□□□ -2
HMGA1P17096 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.55□□□□□ -2
HMGA1P17096 RPS27AP1-201ENST00000475545 471 ntBASIC2.55□□□□□ -2
HMGA1P17096 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.55□□□□□ -2
HMGA1P17096 RPL36AP51-201ENST00000487216 318 ntBASIC2.55□□□□□ -2
HMGA1P17096 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.55□□□□□ -2
HMGA1P17096 AL845331.3-202ENST00000562856 261 ntBASIC2.55□□□□□ -2
HMGA1P17096 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.55□□□□□ -2
HMGA1P17096 AC103810.6-201ENST00000606708 136 ntBASIC2.55□□□□□ -2
HMGA1P17096 AC046143.2-201ENST00000609789 160 ntBASIC2.55□□□□□ -2
HMGA1P17096 AC069528.2-201ENST00000624849 1991 ntBASIC2.55□□□□□ -2
HMGA1P17096 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HMGA1P17096 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HMGA1P17096 ZNF658B-202ENST00000615961 3375 ntBASIC2.55□□□□□ -2
HMGA1P17096 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HMGA1P17096 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HMGA1P17096 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HMGA1P17096 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGA1P17096 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.54□□□□□ -2
HMGA1P17096 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.54□□□□□ -2
HMGA1P17096 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMGA1P17096 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMGA1P17096 SNORA70B-201ENST00000384210 135 ntBASIC2.54□□□□□ -2
HMGA1P17096 AL139095.1-201ENST00000404326 391 ntBASIC2.54□□□□□ -2
HMGA1P17096 SMC4P1-201ENST00000414479 527 ntBASIC2.54□□□□□ -2
HMGA1P17096 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.54□□□□□ -2
HMGA1P17096 ST13P20-201ENST00000447996 1065 ntBASIC2.54□□□□□ -2
HMGA1P17096 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.54□□□□□ -2
HMGA1P17096 AC133134.1-201ENST00000466800 359 ntBASIC2.54□□□□□ -2
HMGA1P17096 RPL21P18-201ENST00000469899 480 ntBASIC2.54□□□□□ -2
HMGA1P17096 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.54□□□□□ -2
HMGA1P17096 RPL9P33-201ENST00000484311 566 ntBASIC2.54□□□□□ -2
HMGA1P17096 RNA5SP309-201ENST00000516670 106 ntBASIC2.54□□□□□ -2
HMGA1P17096 OR5BN1P-201ENST00000532955 829 ntBASIC2.54□□□□□ -2
HMGA1P17096 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.54□□□□□ -2
HMGA1P17096 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.54□□□□□ -2
HMGA1P17096 AC007938.3-201ENST00000604965 623 ntBASIC2.54□□□□□ -2
HMGA1P17096 AC023813.4-201ENST00000607580 580 ntBASIC2.54□□□□□ -2
HMGA1P17096 AC012531.5-201ENST00000611375 151 ntBASIC2.54□□□□□ -2
HMGA1P17096 AL592437.2-201ENST00000421655 2434 ntBASIC2.54□□□□□ -2
HMGA1P17096 AC116096.1-201ENST00000566804 2314 ntBASIC2.54□□□□□ -2
HMGA1P17096 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.54□□□□□ -2
HMGA1P17096 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
HMGA1P17096 MTCO1P14-201ENST00000441695 1559 ntBASIC2.53□□□□□ -2
HMGA1P17096 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGA1P17096 AC233263.6-201ENST00000631132 1963 ntBASIC2.53□□□□□ -2
HMGA1P17096 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.53□□□□□ -2
HMGA1P17096 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.53□□□□□ -2
HMGA1P17096 SNORD114-30-201ENST00000364448 72 ntBASIC2.53□□□□□ -2
HMGA1P17096 Z98742.3-201ENST00000418637 326 ntBASIC2.53□□□□□ -2
HMGA1P17096 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.53□□□□□ -2
HMGA1P17096 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.53□□□□□ -2
HMGA1P17096 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.53□□□□□ -2
HMGA1P17096 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
HMGA1P17096 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
HMGA1P17096 RPL23AP62-201ENST00000463396 453 ntBASIC2.53□□□□□ -2
HMGA1P17096 TRAV31-201ENST00000502780 342 ntBASIC2.53□□□□□ -2
HMGA1P17096 AC108471.1-201ENST00000513977 287 ntBASIC2.53□□□□□ -2
HMGA1P17096 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.53□□□□□ -2
HMGA1P17096 OR7K1P-201ENST00000546439 926 ntBASIC2.53□□□□□ -2
HMGA1P17096 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.53□□□□□ -2
HMGA1P17096 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.53□□□□□ -2
HMGA1P17096 RN7SL371P-201ENST00000578099 267 ntBASIC2.53□□□□□ -2
HMGA1P17096 SNORA35B-201ENST00000607417 129 ntBASIC2.53□□□□□ -2
HMGA1P17096 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.53□□□□□ -2
HMGA1P17096 AC087241.4-201ENST00000612441 480 ntBASIC2.53□□□□□ -2
HMGA1P17096 MIR1291-201ENST00000627649 87 ntBASIC2.53□□□□□ -2
HMGA1P17096 BX005019.1-201ENST00000561881 1810 ntBASIC2.53□□□□□ -2
HMGA1P17096 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGA1P17096 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
HMGA1P17096 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HMGA1P17096 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGA1P17096 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HMGA1P17096 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGA1P17096 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGA1P17096 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGA1P17096 AL390023.1-201ENST00000428836 262 ntBASIC2.52□□□□□ -2.01
HMGA1P17096 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGA1P17096 RPL21P112-201ENST00000434403 463 ntBASIC2.52□□□□□ -2.01
HMGA1P17096 AC092013.1-201ENST00000438795 332 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms