Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNORA64.4-201ENST00000516632 81 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 AP000790.1-201ENST00000528891 737 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.35□□□□□ -2.03
SPTA1P02549 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.35□□□□□ -2.03
SPTA1P02549 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.35□□□□□ -2.03
SPTA1P02549 AC093673.2-201ENST00000609674 331 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
SPTA1P02549 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.35□□□□□ -2.03
SPTA1P02549 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SPTA1P02549 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.34□□□□□ -2.03
SPTA1P02549 MTCO3P11-201ENST00000455103 774 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 VWA8P1-201ENST00000510889 176 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.34□□□□□ -2.03
SPTA1P02549 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SPTA1P02549 AC008277.2-201ENST00000605196 797 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SPTA1P02549 AC096644.4-201ENST00000563417 2912 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.34□□□□□ -2.03
SPTA1P02549 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SPTA1P02549 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.34□□□□□ -2.03
SPTA1P02549 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
SPTA1P02549 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SPTA1P02549 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SPTA1P02549 AP003122.5-201ENST00000527668 3766 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SPTA1P02549 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.34□□□□□ -2.03
SPTA1P02549 RPL32P35-201ENST00000415214 394 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 AC009263.1-201ENST00000441193 1239 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.34□□□□□ -2.03
SPTA1P02549 AC117522.2-201ENST00000510049 657 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.34□□□□□ -2.03
SPTA1P02549 RANP3-201ENST00000530970 276 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 AP005136.1-201ENST00000579765 429 ntBASIC2.34□□□□□ -2.03
SPTA1P02549 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SPTA1P02549 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
SPTA1P02549 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.34□□□□□ -2.04
SPTA1P02549 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SPTA1P02549 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
SPTA1P02549 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SPTA1P02549 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTA1P02549 AL592437.1-201ENST00000443781 492 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 HMGN1P5-201ENST00000448591 263 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTA1P02549 RN7SL330P-201ENST00000469709 307 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 RN7SL633P-201ENST00000488974 297 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AC026412.2-201ENST00000512270 1075 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 OR5AK3P-201ENST00000527486 1297 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 GNAI2P1-201ENST00000541815 315 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AL109741.3-201ENST00000561748 592 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 RMST_8.1-201ENST00000610287 165 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AC004696.1-201ENST00000614345 607 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AL136981.2-201ENST00000617319 734 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AC010338.1-201ENST00000621823 717 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SPTA1P02549 AL353743.4-201ENST00000422653 1547 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTA1P02549 MIR148B-201ENST00000362252 99 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 SNORD56.3-201ENST00000363507 71 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 RNU6-392P-201ENST00000364926 101 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 RPL31P12-201ENST00000422587 358 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 GLRXP1-201ENST00000423261 334 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AL365396.1-201ENST00000430854 671 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTA1P02549 RPL12P25-201ENST00000455592 494 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AC004801.2-202ENST00000463559 283 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTA1P02549 AC068657.1-201ENST00000520807 306 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 OR5BN1P-201ENST00000532955 829 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTA1P02549 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.33□□□□□ -2.04
SPTA1P02549 AC074029.1-201ENST00000552531 1044 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTA1P02549 AC090115.4-201ENST00000609970 188 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AL359715.5-201ENST00000623431 443 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 CR381653.2-201ENST00000624041 768 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTA1P02549 AC007390.2-201ENST00000606229 3803 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 AC002543.1-201ENST00000299783 1954 ntBASIC2.33□□□□□ -2.04
SPTA1P02549 USP9YP6-201ENST00000413550 854 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.32□□□□□ -2.04
SPTA1P02549 USP9YP34-201ENST00000453983 808 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.32□□□□□ -2.04
SPTA1P02549 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.32□□□□□ -2.04
SPTA1P02549 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.32□□□□□ -2.04
SPTA1P02549 AP004372.1-201ENST00000604842 844 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 AL359821.1-201ENST00000605519 182 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 AC006111.3-201ENST00000622137 383 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.32□□□□□ -2.04
SPTA1P02549 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.32□□□□□ -2.04
SPTA1P02549 AL356292.1-201ENST00000283110 373 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SPTA1P02549 LAP3P1-201ENST00000403648 294 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 RNA5SP274-201ENST00000410484 108 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 NANOGP5-201ENST00000424456 877 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.32□□□□□ -2.04
SPTA1P02549 BTG3P1-201ENST00000435859 716 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SPTA1P02549 ST13P14-201ENST00000474095 734 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 AC023813.4-201ENST00000607580 580 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms