Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC092656.1-203ENST00000624134 423 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 AC090582.1-201ENST00000636321 199 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAPGEF3O95398 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RAPGEF3O95398 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.84□□□□□ -1.48
RAPGEF3O95398 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAPGEF3O95398 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAPGEF3O95398 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAPGEF3O95398 GNG5P1-201ENST00000255500 204 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 Y_RNA.510-201ENST00000384511 114 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 Y_RNA.553-201ENST00000384670 102 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 MIR92A2-201ENST00000385299 75 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 SOD2P1-201ENST00000396543 562 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 RNU6-648P-201ENST00000410190 107 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 RPL7P8-201ENST00000411964 730 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 PGBD4P8-201ENST00000412993 562 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 MTCO3P41-201ENST00000414801 328 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 NPM1P24-201ENST00000428039 894 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 RPL23AP89-201ENST00000439324 255 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 AC012158.1-204ENST00000483430 465 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 RSL24D1P11-201ENST00000591045 491 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 MTCYBP22-201ENST00000603788 447 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAPGEF3O95398 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAPGEF3O95398 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAPGEF3O95398 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAPGEF3O95398 AL445437.1-201ENST00000623157 3087 ntBASIC5.83□□□□□ -1.48
RAPGEF3O95398 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.83□□□□□ -1.48
RAPGEF3O95398 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAPGEF3O95398 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 RNA5SP50-201ENST00000363731 107 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 RNU1-33P-201ENST00000364249 162 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 RNU6-1122P-201ENST00000384449 107 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 Y_RNA.559-201ENST00000384686 107 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 MTCO3P31-201ENST00000405526 789 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 TPMTP3-201ENST00000411928 735 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 MTCYBP38-201ENST00000417160 1123 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC009237.2-201ENST00000421358 284 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AL049610.1-201ENST00000423374 372 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 DLGAP5P1-201ENST00000430307 464 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 RPL23AP15-201ENST00000450202 459 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 SLC31A1P1-201ENST00000451221 567 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 RPS15AP1-201ENST00000457423 391 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 RPL21P11-201ENST00000461458 483 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC008481.1-201ENST00000463278 396 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC116337.2-201ENST00000477662 156 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC068724.1-201ENST00000487100 792 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC091965.2-201ENST00000512324 613 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 RN7SKP96-201ENST00000516948 297 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 AP000873.5-201ENST00000533906 236 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 ROCK1P1-201ENST00000573767 549 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC008507.1-201ENST00000587506 734 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC020914.6-201ENST00000594327 272 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AL137849.1-201ENST00000604767 169 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC024560.3-201ENST00000608482 349 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC116447.1-201ENST00000613153 453 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 MIR8069-1-201ENST00000616627 86 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 MIR8069-2-201ENST00000621412 86 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC009878.1-201ENST00000621819 340 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 AP005264.7-201ENST00000625003 745 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AC006927.3-201ENST00000638789 384 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RAPGEF3O95398 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RAPGEF3O95398 MTND5P24-201ENST00000438892 1767 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 AL022393.1-201ENST00000625142 1677 ntBASIC5.82□□□□□ -1.48
RAPGEF3O95398 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.81□□□□□ -1.48
RAPGEF3O95398 ZNF37BP-203ENST00000452306 1352 ntBASIC5.81□□□□□ -1.48
RAPGEF3O95398 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RAPGEF3O95398 OR5BR1P-201ENST00000524992 1330 ntBASIC5.81□□□□□ -1.48
RAPGEF3O95398 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.81□□□□□ -1.48
RAPGEF3O95398 RNU4-21P-201ENST00000362802 126 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms