Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 PRO1804-201ENST00000623780 2050 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 SNORA63.1-201ENST00000362493 131 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 RNA5SP119-201ENST00000362715 117 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 RNA5SP387-201ENST00000364226 106 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 RNU6-761P-201ENST00000384148 107 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 RNU1-89P-201ENST00000384592 164 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 RNU6-925P-201ENST00000384629 104 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 MIR23A-201ENST00000385245 73 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC007066.1-201ENST00000392902 381 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 MTCO1P56-201ENST00000401674 224 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AL133384.1-201ENST00000412744 351 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 RPS29P4-201ENST00000414733 161 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 TOMM22P1-201ENST00000418578 312 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 OSTCP5-201ENST00000425293 453 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 RAC1P8-201ENST00000427086 527 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 HMGN2P31-201ENST00000432430 273 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC093155.1-201ENST00000440164 826 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 MTCO3P2-201ENST00000457365 171 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 U3.44-201ENST00000458938 192 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC108941.1-201ENST00000502853 530 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 MTCYBP37-201ENST00000510642 1133 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 DUXAP2-201ENST00000519198 589 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC007991.1-201ENST00000522680 631 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC021451.1-201ENST00000523498 1129 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AP001317.1-201ENST00000531194 960 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC090877.1-201ENST00000561418 344 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 MIR3186-201ENST00000577404 85 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 MIR5187-201ENST00000583479 76 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC103881.1-201ENST00000603476 538 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AL365400.2-201ENST00000605604 902 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC006023.2-201ENST00000609916 167 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC019176.2-201ENST00000611579 315 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC084757.4-201ENST00000616350 526 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AC109454.4-201ENST00000623411 649 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 MFSD8-245ENST00000641743 948 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NPIPA2E9PIF3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
NPIPA2E9PIF3 MIR208A-201ENST00000362287 71 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RNU6-492P-201ENST00000363035 104 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RNU6-251P-201ENST00000363235 104 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RNU6-1066P-201ENST00000363573 105 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AP000567.1-201ENST00000406413 156 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RNU4-78P-201ENST00000410940 126 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RPS3AP25-201ENST00000411660 793 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC006548.1-201ENST00000427470 102 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 HIGD1AP12-201ENST00000427832 281 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 MOB1AP1-201ENST00000430903 535 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 SEPT7P5-201ENST00000434048 306 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 HSPD1P21-201ENST00000436541 245 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC092393.1-201ENST00000439625 742 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 PDSS1P2-201ENST00000449397 678 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC092754.2-201ENST00000463506 460 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 VN1R17P-201ENST00000472048 1090 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC010301.1-201ENST00000473936 355 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RPL23AP55-201ENST00000498163 452 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC006499.5-201ENST00000505037 514 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC004069.2-201ENST00000505438 1114 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 HMGB3P15-201ENST00000507326 574 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RN7SKP18-201ENST00000516005 275 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RN7SKP244-201ENST00000516513 307 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms