Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 RNU5B-1-201ENST00000363286 116 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 SNORA7.2-201ENST00000364446 145 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 RNU6-335P-201ENST00000364563 113 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 RNA5SP479-201ENST00000364858 117 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 SNORA40.4-201ENST00000390971 128 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AL121978.1-201ENST00000402778 359 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 GSTA8P-201ENST00000404253 637 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 ARL4AP4-201ENST00000434170 518 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 HMGB1P38-201ENST00000490557 577 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC091860.1-201ENST00000505723 432 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC026403.1-201ENST00000518938 295 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AP000790.1-201ENST00000528891 737 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC092451.2-201ENST00000538746 658 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC007458.1-201ENST00000542812 373 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC113368.1-201ENST00000603736 382 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC073657.2-201ENST00000605661 303 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 AC039056.2-201ENST00000622261 511 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TCRBV9S1A1TA0A576 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 Z83843.1-201ENST00000604070 3685 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 OR6K3-202ENST00000368146 996 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 MIR607-201ENST00000385241 96 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 MT-TC-201ENST00000387405 66 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 HSPE1P26-201ENST00000405341 275 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AL355615.1-201ENST00000406187 641 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 MIR1193-201ENST00000408109 78 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 RNA5SP56-201ENST00000410277 118 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 RNU6-575P-201ENST00000411326 105 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC092638.1-201ENST00000411966 1275 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC017083.1-201ENST00000428093 483 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC018644.1-201ENST00000429934 551 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 RPS7P2-201ENST00000435134 607 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AL133547.1-201ENST00000448546 220 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC104073.1-201ENST00000451988 151 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 HMGN2P7-201ENST00000456186 273 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 RPL7P15-201ENST00000461190 712 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC048346.1-201ENST00000510247 144 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 MTCO3P44-201ENST00000510977 541 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC109471.1-201ENST00000511631 612 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC106785.1-201ENST00000565935 262 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 RPAP2P1-201ENST00000603626 1168 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 VN1R74P-201ENST00000613259 503 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AL354976.1-201ENST00000613843 387 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC009464.1-201ENST00000615731 469 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AP000943.4-201ENST00000622912 357 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC012442.3-202ENST00000636742 206 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV9S1A1TA0A576 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.18□□□□□ -1.9
TCRBV9S1A1TA0A576 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TCRBV9S1A1TA0A576 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TCRBV9S1A1TA0A576 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TCRBV9S1A1TA0A576 AL121972.1-201ENST00000402023 252 ntBASIC3.18□□□□□ -1.9
TCRBV9S1A1TA0A576 AL139098.1-201ENST00000407291 389 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms