Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 RPS15AP1-201ENST00000457423 391 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AC011276.1-201ENST00000469688 323 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 RN7SL604P-201ENST00000492589 296 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 RNU6-202P-201ENST00000515998 96 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 Y_RNA.672-201ENST00000516289 104 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AP003034.1-201ENST00000534621 422 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 HIF1AP1-201ENST00000553642 175 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 AL049839.1-201ENST00000556151 657 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 MIR3939-201ENST00000582614 106 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 MIR4660-201ENST00000583549 74 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 MIR4795-201ENST00000584182 89 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 MIR92B-201ENST00000607575 96 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 OR11H5P-202ENST00000641612 1325 ntBASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDLIM7Q9NR12 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC009951.1-201ENST00000623674 2614 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 MIR134-201ENST00000385258 73 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 RNA5SP397-201ENST00000391323 118 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC007390.1-201ENST00000415722 356 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 SDCBPP2-201ENST00000424643 885 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 RPEP2-201ENST00000432149 701 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC132479.1-201ENST00000449160 144 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 SNRPGP6-201ENST00000451124 220 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC090142.1-201ENST00000465776 462 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 MTCO3P9-201ENST00000506989 781 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC133555.2-201ENST00000550213 292 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC018552.3-201ENST00000567416 561 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 NF1P5-201ENST00000588287 448 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AP001429.1-201ENST00000602568 530 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC090948.2-201ENST00000607363 564 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AL442067.2-201ENST00000614033 363 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC019206.1-201ENST00000621938 425 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC063976.2-201ENST00000425667 3556 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 OR56B2P-202ENST00000641377 2453 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 AL450326.2-201ENST00000421913 1962 ntBASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM7Q9NR12 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RNA5SP509-201ENST00000364577 119 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 Y_RNA.548-201ENST00000384656 105 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC007738.1-201ENST00000413892 348 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC013429.2-201ENST00000418798 781 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AL590609.2-201ENST00000421430 368 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AL353193.1-201ENST00000421444 268 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC133104.1-201ENST00000429100 218 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RPS27AP12-201ENST00000429552 465 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RPS26P40-201ENST00000435209 294 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RPL12P46-201ENST00000436610 195 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 EEF1A1P1-201ENST00000447052 739 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RPL23AP20-201ENST00000447965 421 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 MTND1P12-201ENST00000455231 147 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RNU7-136P-201ENST00000458819 69 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 FAM172BP-201ENST00000487497 1089 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms