Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RN7SL604P-201ENST00000492589 296 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 FTH1P21-201ENST00000512179 511 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 snoU109.6-201ENST00000516831 118 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 OR4C2P-201ENST00000530855 1064 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 OR6C7P-201ENST00000547875 934 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC007954.1-201ENST00000554198 494 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC008507.1-201ENST00000587506 734 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 ELOCP34-201ENST00000604436 327 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 NDUFA8P1-201ENST00000605525 367 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC023813.4-201ENST00000607580 580 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 MIR4727-201ENST00000622232 55 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC015908.5-201ENST00000623289 343 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 CDRT1-208ENST00000630868 794 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC092447.7-201ENST00000422212 1621 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
EBF3Q9H4W6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
EBF3Q9H4W6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
EBF3Q9H4W6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 CYP1D1P-201ENST00000416662 1433 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC011477.1-204ENST00000623416 1325 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 OR11H4-201ENST00000315409 1082 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 RNY4P24-201ENST00000362735 96 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 RNU6-225P-201ENST00000384613 103 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 CYCSP19-201ENST00000411715 316 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 CYCSP46-201ENST00000423569 204 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 RPL7P44-201ENST00000424827 742 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 RPL23AP46-201ENST00000438548 490 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 UBE2V1P7-201ENST00000446395 340 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 VN1R34P-201ENST00000447387 883 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 ST13P20-201ENST00000447996 1065 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 VPS26AP1-201ENST00000483197 979 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AL035404.1-201ENST00000497982 568 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC079395.1-201ENST00000510981 262 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC010587.2-201ENST00000511727 448 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 SNORA67.7-201ENST00000516664 135 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC025881.1-201ENST00000518851 512 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC006064.5-201ENST00000541782 248 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 RPL23AP97-201ENST00000568955 471 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 RN7SL703P-201ENST00000578485 302 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC091805.2-201ENST00000603848 235 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC006133.1-201ENST00000617106 264 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC095031.1-201ENST00000623685 672 ntBASIC4.33□□□□□ -1.72
EBF3Q9H4W6 AC099654.12-201ENST00000639868 649 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms