Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4□□□□□ -1.77
RAD9AQ99638 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4□□□□□ -1.77
RAD9AQ99638 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4□□□□□ -1.77
RAD9AQ99638 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4□□□□□ -1.77
RAD9AQ99638 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4□□□□□ -1.77
RAD9AQ99638 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4□□□□□ -1.77
RAD9AQ99638 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4□□□□□ -1.77
RAD9AQ99638 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4□□□□□ -1.77
RAD9AQ99638 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4□□□□□ -1.77
RAD9AQ99638 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
RAD9AQ99638 MIR3912-201ENST00000577566 105 ntBASIC4□□□□□ -1.77
RAD9AQ99638 MTND3P19-201ENST00000603825 345 ntBASIC4□□□□□ -1.77
RAD9AQ99638 AC021749.1-201ENST00000604322 607 ntBASIC4□□□□□ -1.77
RAD9AQ99638 RNA5SP108-201ENST00000605921 117 ntBASIC4□□□□□ -1.77
RAD9AQ99638 AC016877.3-201ENST00000606778 504 ntBASIC4□□□□□ -1.77
RAD9AQ99638 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4□□□□□ -1.77
RAD9AQ99638 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4□□□□□ -1.77
RAD9AQ99638 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4□□□□□ -1.77
RAD9AQ99638 AC121761.2-201ENST00000617300 689 ntBASIC4□□□□□ -1.77
RAD9AQ99638 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4□□□□□ -1.77
RAD9AQ99638 AC090897.3-201ENST00000636973 1157 ntBASIC4□□□□□ -1.77
RAD9AQ99638 AL773545.4-201ENST00000637262 310 ntBASIC4□□□□□ -1.77
RAD9AQ99638 AL513478.4-201ENST00000641636 310 ntBASIC4□□□□□ -1.77
RAD9AQ99638 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RAD9AQ99638 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RAD9AQ99638 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RAD9AQ99638 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4□□□□□ -1.77
RAD9AQ99638 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4□□□□□ -1.77
RAD9AQ99638 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.99□□□□□ -1.77
RAD9AQ99638 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAD9AQ99638 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.99□□□□□ -1.77
RAD9AQ99638 MTND5P28-201ENST00000438005 1594 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAD9AQ99638 SNORA38.1-201ENST00000364172 131 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.99□□□□□ -1.77
RAD9AQ99638 RNU6-636P-201ENST00000384598 107 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 SNORD116-23-201ENST00000384645 92 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 RNU6-1242P-201ENST00000391052 103 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAD9AQ99638 AL121978.1-201ENST00000402778 359 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 MTCO3P31-201ENST00000405526 789 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.99□□□□□ -1.77
RAD9AQ99638 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RAD9AQ99638 DPRXP1-201ENST00000426312 460 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 RPP40P1-201ENST00000426762 456 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.99□□□□□ -1.77
RAD9AQ99638 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.99□□□□□ -1.77
RAD9AQ99638 GTF2IP7-202ENST00000436677 309 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.99□□□□□ -1.77
RAD9AQ99638 CR769776.1-201ENST00000441254 787 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.99□□□□□ -1.77
RAD9AQ99638 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RAD9AQ99638 AC079776.3-201ENST00000450665 370 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.99□□□□□ -1.77
RAD9AQ99638 AC008155.2-201ENST00000464337 397 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AC025554.1-201ENST00000505641 188 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.99□□□□□ -1.77
RAD9AQ99638 PTGES3P3-201ENST00000511479 482 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.99□□□□□ -1.77
RAD9AQ99638 RNU1-103P-201ENST00000516502 125 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.99□□□□□ -1.77
RAD9AQ99638 AC008802.1-201ENST00000519121 791 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AC011611.1-201ENST00000552179 197 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.99□□□□□ -1.77
RAD9AQ99638 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.99□□□□□ -1.77
RAD9AQ99638 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.99□□□□□ -1.77
RAD9AQ99638 AC023813.2-201ENST00000564321 469 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.99□□□□□ -1.77
RAD9AQ99638 MTATP6P24-201ENST00000576835 677 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.99□□□□□ -1.77
RAD9AQ99638 AC006116.10-201ENST00000591836 581 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.99□□□□□ -1.77
RAD9AQ99638 HMGB1P50-201ENST00000605814 607 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RAD9AQ99638 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 AL512506.2-201ENST00000624472 458 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.99□□□□□ -1.77
RAD9AQ99638 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAD9AQ99638 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAD9AQ99638 AC011978.2-201ENST00000569835 2054 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 MTND5P31-201ENST00000419366 1374 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAD9AQ99638 AP005901.5-201ENST00000545779 1796 ntBASIC3.99□□□□□ -1.77
RAD9AQ99638 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAD9AQ99638 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAD9AQ99638 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RAD9AQ99638 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RAD9AQ99638 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAD9AQ99638 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAD9AQ99638 AC007823.1-201ENST00000569932 1566 ntBASIC3.98□□□□□ -1.77
RAD9AQ99638 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAD9AQ99638 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.98□□□□□ -1.77
RAD9AQ99638 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAD9AQ99638 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.98□□□□□ -1.77
RAD9AQ99638 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RAD9AQ99638 RNU6-582P-201ENST00000362989 107 ntBASIC3.98□□□□□ -1.77
RAD9AQ99638 RNU6-115P-201ENST00000364310 107 ntBASIC3.98□□□□□ -1.77
RAD9AQ99638 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.98□□□□□ -1.77
RAD9AQ99638 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RAD9AQ99638 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms