Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC7Q96M83 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC7Q96M83 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.11□□□□□ -1.75
CCDC7Q96M83 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC7Q96M83 AC105272.1-201ENST00000438604 198 ntBASIC4.11□□□□□ -1.75
CCDC7Q96M83 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC7Q96M83 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC7Q96M83 RPS4XP13-201ENST00000483219 789 ntBASIC4.11□□□□□ -1.75
CCDC7Q96M83 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC7Q96M83 COL6A4P2-205ENST00000509855 506 ntBASIC4.11□□□□□ -1.75
CCDC7Q96M83 AP002812.4-201ENST00000532139 286 ntBASIC4.11□□□□□ -1.75
CCDC7Q96M83 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC7Q96M83 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC7Q96M83 AC025918.2-201ENST00000558683 763 ntBASIC4.11□□□□□ -1.75
CCDC7Q96M83 AC007423.1-201ENST00000605009 627 ntBASIC4.11□□□□□ -1.75
CCDC7Q96M83 AL645568.2-201ENST00000432815 1337 ntBASIC4.1□□□□□ -1.75
CCDC7Q96M83 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 AC095050.2-201ENST00000510748 1458 ntBASIC4.1□□□□□ -1.75
CCDC7Q96M83 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC7Q96M83 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC7Q96M83 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC7Q96M83 RPS29P6-201ENST00000438196 145 ntBASIC4.1□□□□□ -1.75
CCDC7Q96M83 TPMTP4-201ENST00000450749 678 ntBASIC4.1□□□□□ -1.75
CCDC7Q96M83 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 AP004217.1-201ENST00000480579 346 ntBASIC4.1□□□□□ -1.75
CCDC7Q96M83 AC104687.1-201ENST00000485829 412 ntBASIC4.1□□□□□ -1.75
CCDC7Q96M83 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC7Q96M83 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CCDC7Q96M83 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC7Q96M83 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC7Q96M83 AC134882.1-201ENST00000603738 1676 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC7Q96M83 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC7Q96M83 RPL31P52-201ENST00000407532 367 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 AL357078.2-201ENST00000416486 427 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC7Q96M83 MORF4L1P7-201ENST00000426038 703 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC7Q96M83 AC073069.1-201ENST00000428657 441 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC7Q96M83 AL353093.1-201ENST00000441292 436 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 MTND2P8-201ENST00000450555 1025 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC7Q96M83 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC7Q96M83 RNA5SP367-201ENST00000516557 118 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 CIR1P1-201ENST00000524055 1133 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 AC068446.3-201ENST00000555285 382 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 VN1R84P-201ENST00000593697 235 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC7Q96M83 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC7Q96M83 AC009318.3-201ENST00000616916 503 ntBASIC4.09□□□□□ -1.75
CCDC7Q96M83 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC7Q96M83 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC7Q96M83 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CCDC7Q96M83 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.09□□□□□ -1.76
CCDC7Q96M83 MTND5P19-201ENST00000424872 1794 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC7Q96M83 AC062016.1-201ENST00000355719 319 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 RN7SKP58-201ENST00000411010 305 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 TATDN1P1-201ENST00000414123 891 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 LINC01347-201ENST00000417964 355 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC7Q96M83 AC112653.1-201ENST00000443851 386 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 AC097499.1-201ENST00000444277 208 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC7Q96M83 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC7Q96M83 AC025260.1-201ENST00000548858 430 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 POLR2KP1-201ENST00000553226 168 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 MIR3186-201ENST00000577404 85 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 AC018618.2-201ENST00000604770 446 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 U6.48-201ENST00000618523 106 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CCDC7Q96M83 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
CCDC7Q96M83 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CCDC7Q96M83 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC7Q96M83 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC7Q96M83 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CCDC7Q96M83 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC7Q96M83 AL021368.2-201ENST00000606125 5352 ntBASIC4.08□□□□□ -1.76
CCDC7Q96M83 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC7Q96M83 AC096644.4-201ENST00000563417 2912 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 AC090229.1-201ENST00000590983 1609 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC7Q96M83 AL590290.1-201ENST00000405336 380 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 NUP35P1-201ENST00000422734 947 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 MTND4P15-201ENST00000437913 1033 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 AL162389.1-201ENST00000449233 177 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 HMGN2P7-201ENST00000456186 273 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 MTND2P30-201ENST00000456663 382 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 AC083906.5-201ENST00000503722 328 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms