Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RNU2-65P-201ENST00000410162 185 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 RNA5SP239-201ENST00000410218 129 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 HSPE1P12-201ENST00000412576 301 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 SEPT2P1-201ENST00000419651 180 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TM9SF4Q92544 OR5BE1P-201ENST00000425977 939 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AL589823.1-201ENST00000429577 183 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC018644.1-201ENST00000429934 551 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 RPL36AP13-201ENST00000457490 317 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC104689.1-201ENST00000473356 768 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 SYPL1P1-201ENST00000473622 768 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC106872.2-201ENST00000494303 480 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AL139099.1-201ENST00000497398 403 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC112198.1-201ENST00000505369 1220 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC091435.1-201ENST00000505442 584 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 XKRY-201ENST00000510392 1100 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 RNY4P37-201ENST00000516225 96 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC092851.1-201ENST00000535964 478 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 HSPE1P5-201ENST00000561489 272 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC005951.1-201ENST00000576706 485 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 RN7SL703P-201ENST00000578485 302 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 MIR3915-201ENST00000578518 97 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 MIR3944-201ENST00000581277 108 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AL390838.2-201ENST00000602394 274 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC105129.3-201ENST00000605455 485 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC135507.1-201ENST00000607214 561 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC243756.2-201ENST00000618406 463 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC091931.1-201ENST00000623488 728 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AP003072.4-201ENST00000624580 310 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC007494.3-201ENST00000624660 743 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 CR392039.4-201ENST00000624968 501 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 MKKS-204ENST00000639674 192 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 OR5BE1P-202ENST00000641168 1176 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 AC022031.1-201ENST00000585985 2593 ntBASIC3.8□□□□□ -1.8
TM9SF4Q92544 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TM9SF4Q92544 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC005539.1-201ENST00000443768 1479 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC027287.1-201ENST00000553115 1453 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TM9SF4Q92544 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC087359.1-201ENST00000508335 1740 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TM9SF4Q92544 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TM9SF4Q92544 RNU6-1066P-201ENST00000363573 105 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 SUGT1P1-201ENST00000379514 476 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 Y_RNA.560-201ENST00000384689 102 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 RNU4-6P-201ENST00000410804 122 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 HSFY4P-201ENST00000415994 1181 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC092634.6-201ENST00000418558 192 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC019178.2-201ENST00000423595 505 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC011742.1-201ENST00000431448 434 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AL356276.2-201ENST00000435919 558 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 RPL23AP15-201ENST00000450202 459 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 RPL21P71-201ENST00000465598 459 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC010307.1-201ENST00000467206 836 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AP000926.1-201ENST00000479573 241 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 SETP14-201ENST00000497538 873 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.79□□□□□ -1.8
TM9SF4Q92544 BNIP3P41-201ENST00000503774 571 ntBASIC3.79□□□□□ -1.8
TM9SF4Q92544 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms