Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC023512.1-201ENST00000444513 499 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AL513533.1-201ENST00000453728 415 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 RPS4XP15-201ENST00000489210 795 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC090543.1-201ENST00000492168 485 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 SNORA31.8-201ENST00000516327 108 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC008562.1-201ENST00000521763 330 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 FAM60DP-201ENST00000524174 632 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AP003730.1-201ENST00000524605 285 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AMZ2P1-203ENST00000565833 850 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC015982.1-201ENST00000608113 465 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC009090.3-201ENST00000616553 565 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC010435.1-201ENST00000623353 1177 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 FRG1DP-201ENST00000635586 771 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 AC004944.1-201ENST00000517807 3059 ntBASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.6□□□□□ -2.15
SPTSSBQ8NFR3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 MIR6073-201ENST00000352083 89 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 ACEA_U3.1-201ENST00000363057 217 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 RNU6-167P-201ENST00000384292 106 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AL512633.1-201ENST00000399931 655 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 RPL7P25-201ENST00000404151 721 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC099535.1-201ENST00000408928 371 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 BX510359.3-201ENST00000422168 306 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 RPL37P1-201ENST00000432310 284 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 RPS15AP29-201ENST00000445539 400 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 TPTE2P6-202ENST00000445572 1007 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC078857.1-201ENST00000469870 667 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC004815.1-201ENST00000484185 331 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC008427.1-201ENST00000503102 655 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC093763.2-201ENST00000505334 1223 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 NPM1P41-201ENST00000512920 831 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 SNORA70.17-201ENST00000516449 133 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 SCARNA13-201ENST00000516672 275 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 IGKV2D-36-201ENST00000518643 226 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC007115.1-201ENST00000546853 234 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC090666.1-201ENST00000578241 445 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 SNORD53-201ENST00000579969 78 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 MIR3176-201ENST00000582210 90 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 MIR4658-201ENST00000584344 65 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 MIR3922-201ENST00000585192 84 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 OR1M4P-201ENST00000589199 287 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC015802.5-201ENST00000607478 399 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC112503.2-201ENST00000609005 552 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC106028.5-201ENST00000610332 395 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 MIR6840-201ENST00000611937 71 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 MIR6826-201ENST00000617808 98 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC048341.3-201ENST00000619323 491 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 U4.6-201ENST00000621618 127 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC068880.5-201ENST00000624331 290 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 AC097372.4-201ENST00000625025 466 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 MIR1910-201ENST00000636955 80 ntBASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.59□□□□□ -2.15
SPTSSBQ8NFR3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SPTSSBQ8NFR3 MTND5P28-201ENST00000438005 1594 ntBASIC1.59□□□□□ -2.16
SPTSSBQ8NFR3 AL512283.1-201ENST00000606756 1384 ntBASIC1.59□□□□□ -2.16
SPTSSBQ8NFR3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SPTSSBQ8NFR3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.58□□□□□ -2.16
SPTSSBQ8NFR3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SPTSSBQ8NFR3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SPTSSBQ8NFR3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SPTSSBQ8NFR3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SPTSSBQ8NFR3 RNU6-461P-201ENST00000364195 107 ntBASIC1.58□□□□□ -2.16
SPTSSBQ8NFR3 RNA5SP130-201ENST00000364431 114 ntBASIC1.58□□□□□ -2.16
SPTSSBQ8NFR3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.58□□□□□ -2.16
SPTSSBQ8NFR3 RNU6-31P-201ENST00000384388 108 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms