Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AL355497.1-201ENST00000406262 551 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 MIR1193-201ENST00000408109 78 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 PSMA2P3-201ENST00000429685 675 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 CACYBPP2-201ENST00000453625 678 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AL513533.1-201ENST00000453728 415 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC008427.1-201ENST00000503102 655 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 FTH1P21-201ENST00000512179 511 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC100870.1-201ENST00000522035 505 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AP000676.2-201ENST00000529711 301 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC008083.2-201ENST00000546707 476 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC078814.3-201ENST00000553036 491 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 MIR4635-201ENST00000583759 79 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AL121890.3-201ENST00000618494 516 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AL354798.1-201ENST00000622505 329 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC1.59□□□□□ -2.15
LINC00643Q86TS7 AP000553.5-201ENST00000641933 54 ntBASIC1.59□□□□□ -2.15
LINC00643Q86TS7 MTCO1P6-201ENST00000481192 1384 ntBASIC1.59□□□□□ -2.16
LINC00643Q86TS7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 U3.25-201ENST00000391209 220 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC007066.1-201ENST00000392902 381 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AL590290.1-201ENST00000405336 380 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 RN7SKP27-201ENST00000410684 333 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC073264.1-201ENST00000411508 416 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 ELOCP19-201ENST00000411919 318 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 MYL8P-204ENST00000431574 518 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 ELOCP13-201ENST00000443934 329 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 Z95327.1-201ENST00000446082 482 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC073264.2-201ENST00000448886 166 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 RBMY2UP-201ENST00000453474 324 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC117440.1-201ENST00000474107 571 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC104435.1-201ENST00000483483 166 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC008413.1-201ENST00000511864 177 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 RNA5SP364-201ENST00000516938 78 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC007991.1-201ENST00000522680 631 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AL138976.2-201ENST00000563989 694 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 MIR4448-201ENST00000584360 86 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC005242.1-201ENST00000585658 438 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 MIR6867-201ENST00000610636 67 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 AC244517.1-201ENST00000606030 2086 ntBASIC1.58□□□□□ -2.16
LINC00643Q86TS7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LINC00643Q86TS7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
LINC00643Q86TS7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LINC00643Q86TS7 PPIAP31-201ENST00000405422 495 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 RNA5SP120-201ENST00000410900 112 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 RPL23AP27-201ENST00000415161 451 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 MTCO2P17-201ENST00000424336 677 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 DUTP6-201ENST00000425573 462 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 C4BPAP2-201ENST00000428434 478 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 AC098826.1-201ENST00000433943 471 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 CLNS1AP1-201ENST00000435954 682 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 AL139109.1-201ENST00000455491 297 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC00643Q86TS7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC00643Q86TS7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
LINC00643Q86TS7 HMGB1P22-201ENST00000505315 124 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 AC002456.2-201ENST00000509356 380 ntBASIC1.57□□□□□ -2.16
LINC00643Q86TS7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms