Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CX3CL1P78423 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CL1P78423 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CL1P78423 CR383658.2-201ENST00000547576 1525 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 MFSD8-216ENST00000641147 4009 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.49□□□□□ -1.85
CX3CL1P78423 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC027287.1-201ENST00000553115 1453 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CL1P78423 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC090337.1-201ENST00000579651 2074 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AL603766.1-201ENST00000407763 664 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 TMSB10P2-201ENST00000416049 131 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 RAC1P3-201ENST00000416129 580 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC245052.5-201ENST00000416320 649 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AL356387.2-201ENST00000422272 243 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AL732292.1-201ENST00000426692 226 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.49□□□□□ -1.85
CX3CL1P78423 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 PRELID3BP10-201ENST00000431957 584 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AL132765.1-201ENST00000434165 553 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 RSU1P2-202ENST00000437884 485 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AL831737.1-201ENST00000441288 271 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.49□□□□□ -1.85
CX3CL1P78423 MTND2P4-201ENST00000445034 1004 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 HMGN2P21-201ENST00000447764 270 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 RPL7P52-201ENST00000449200 742 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.49□□□□□ -1.85
CX3CL1P78423 HMGB1P15-201ENST00000453854 435 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 DHFRP3-201ENST00000455595 559 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 snoU109.4-201ENST00000458953 143 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 snoU13.1-201ENST00000459157 104 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 RN7SL738P-201ENST00000470264 297 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 RPS26P15-201ENST00000488067 348 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 RPS4XP15-201ENST00000489210 795 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC006390.1-201ENST00000508068 283 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC117522.2-201ENST00000510049 657 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 OR5BM1P-201ENST00000512021 366 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC034159.1-201ENST00000513885 583 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC106038.2-201ENST00000520706 568 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC013828.2-201ENST00000532487 235 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.49□□□□□ -1.85
CX3CL1P78423 GTF2IP22-201ENST00000554443 182 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 RPL23AP97-201ENST00000568955 471 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC090616.5-202ENST00000582111 297 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 MIR4715-201ENST00000584117 79 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.49□□□□□ -1.85
CX3CL1P78423 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.49□□□□□ -1.85
CX3CL1P78423 BNIP3P23-201ENST00000599655 511 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC097468.3-201ENST00000607956 456 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 OR6R2P-201ENST00000609216 300 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC103710.4-201ENST00000609301 899 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC018755.4-201ENST00000619715 454 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AC008443.7-201ENST00000622195 246 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 AP000346.3-201ENST00000622821 210 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC006927.3-201ENST00000638789 384 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.49□□□□□ -1.85
CX3CL1P78423 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CL1P78423 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CX3CL1P78423 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CL1P78423 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CL1P78423 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CX3CL1P78423 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CX3CL1P78423 CR381670.1-201ENST00000624291 1693 ntBASIC3.49□□□□□ -1.85
CX3CL1P78423 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CX3CL1P78423 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.48□□□□□ -1.85
CX3CL1P78423 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CX3CL1P78423 OR5P1P-201ENST00000299512 925 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 AL672167.1-206ENST00000356293 943 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 RNA5SP258-201ENST00000362750 119 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 RNU4-40P-201ENST00000364351 143 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 Y_RNA.234-201ENST00000364409 97 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 RNU6-744P-201ENST00000365557 107 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 RNU6-1316P-201ENST00000384242 108 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 AL583834.1-201ENST00000406943 343 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.48□□□□□ -1.85
CX3CL1P78423 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.48□□□□□ -1.85
CX3CL1P78423 JKAMPP1-201ENST00000413804 919 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 AC092447.6-201ENST00000414578 210 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 RPL26P29-201ENST00000415623 438 ntBASIC3.48□□□□□ -1.85
CX3CL1P78423 RPL36AP36-201ENST00000418616 301 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms