Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL365203.2-201ENST00000423444 196 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 SDCBPP2-201ENST00000424643 885 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC4P56524 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC4P56524 RPS27AP12-201ENST00000429552 465 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC4P56524 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC4P56524 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC4P56524 AL359073.1-201ENST00000448036 403 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.27□□□□□ -1.73
HDAC4P56524 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC4P56524 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC4P56524 AC005726.1-201ENST00000494679 427 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC4P56524 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC4P56524 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC4P56524 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC4P56524 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.27□□□□□ -1.73
HDAC4P56524 AC025884.1-201ENST00000556034 378 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC4P56524 SNORD39.3-201ENST00000584451 71 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 MIR5684-201ENST00000585074 65 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC4P56524 AC244505.7-201ENST00000599675 272 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AC010620.1-201ENST00000601088 1102 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 Z94722.1-201ENST00000604328 474 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AL009028.1-201ENST00000604895 802 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AL603755.1-201ENST00000619504 163 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AC079248.2-201ENST00000623779 326 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AC120349.2-201ENST00000625002 298 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AP003399.1-201ENST00000637534 361 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 SAGE4P-201ENST00000442271 3381 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC4P56524 AC117529.2-201ENST00000512159 2068 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HDAC4P56524 RNU6-216P-201ENST00000363282 104 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 SNORD6-201ENST00000365444 73 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AL359837.1-201ENST00000381357 287 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 AL590084.2-201ENST00000401481 382 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 Z98941.1-201ENST00000407764 100 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 MIR1250-201ENST00000408098 113 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 OR8G2P-201ENST00000412796 908 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 AC090960.1-201ENST00000421072 306 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 AL451062.2-201ENST00000427515 271 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AL356276.2-201ENST00000435919 558 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 MTCYBP34-201ENST00000439552 670 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 RPL23AP33-201ENST00000442301 452 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.26□□□□□ -1.73
HDAC4P56524 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.26□□□□□ -1.73
HDAC4P56524 RNU7-170P-201ENST00000459303 61 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AC010468.1-201ENST00000461022 817 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 RPL7P1-201ENST00000468161 747 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 RPL7P9-201ENST00000468715 747 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AC034236.1-201ENST00000469891 373 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AC010301.1-201ENST00000473936 355 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 RPL7P38-201ENST00000488396 739 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
HDAC4P56524 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HDAC4P56524 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.26□□□□□ -1.73
HDAC4P56524 HIGD1AP3-201ENST00000515857 278 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 RNY4P37-201ENST00000516225 96 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 RNU6-759P-201ENST00000516740 103 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 MRPL49P2-201ENST00000521066 465 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.26□□□□□ -1.73
HDAC4P56524 OR4A12P-201ENST00000530847 918 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.26□□□□□ -1.73
HDAC4P56524 AC125611.1-201ENST00000549563 229 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.26□□□□□ -1.73
HDAC4P56524 AL360157.1-201ENST00000565962 87 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC4P56524 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.26□□□□□ -1.73
HDAC4P56524 AC005255.1-201ENST00000593748 216 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 RNA5SP108-201ENST00000605921 117 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AC012603.1-201ENST00000606424 528 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 AC068722.2-201ENST00000618734 544 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AC004943.3-201ENST00000624116 600 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 AC010608.2-201ENST00000624830 470 ntBASIC4.26□□□□□ -1.73
HDAC4P56524 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms