Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
EPHA4P54764 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
EPHA4P54764 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
EPHA4P54764 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
EPHA4P54764 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 AC093775.1-201ENST00000624154 1868 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 OR52B3P-201ENST00000314715 928 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 RNA5SP375-201ENST00000362975 119 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 SNORD8-201ENST00000363915 110 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 Y_RNA.257-201ENST00000364596 102 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 RNU6-946P-201ENST00000383878 107 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 RPS3AP2-201ENST00000407190 754 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHA4P54764 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHA4P54764 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHA4P54764 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHA4P54764 RPL21P109-201ENST00000422213 475 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 RPL23AP50-201ENST00000434149 455 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHA4P54764 HMGB1P12-201ENST00000438594 598 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 CYCSP24-201ENST00000445119 316 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHA4P54764 AC093815.1-201ENST00000508637 280 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 RNU6-323P-201ENST00000521915 107 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHA4P54764 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHA4P54764 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 RNU4ATAC-201ENST00000580972 127 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 MIR3614-201ENST00000581261 86 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 AC005899.2-201ENST00000584353 90 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 AC119403.2-201ENST00000590960 598 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.83□□□□□ -1.48
EPHA4P54764 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHA4P54764 AC116447.1-201ENST00000613153 453 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 IQCB2P-201ENST00000401788 1633 ntBASIC5.83□□□□□ -1.48
EPHA4P54764 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.83□□□□□ -1.48
EPHA4P54764 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.83□□□□□ -1.48
EPHA4P54764 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHA4P54764 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
EPHA4P54764 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHA4P54764 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHA4P54764 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
EPHA4P54764 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.82□□□□□ -1.48
EPHA4P54764 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
EPHA4P54764 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHA4P54764 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
EPHA4P54764 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
EPHA4P54764 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.82□□□□□ -1.48
EPHA4P54764 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHA4P54764 RNU1-150P-201ENST00000362491 162 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.82□□□□□ -1.48
EPHA4P54764 Y_RNA.404-201ENST00000383978 102 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 RNU11-4P-201ENST00000391149 133 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 SNORA17A-201ENST00000391185 133 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AC116036.1-201ENST00000412199 367 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AC080125.1-201ENST00000414888 684 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AL356968.1-201ENST00000416622 474 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHA4P54764 MTND6P12-201ENST00000428247 522 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHA4P54764 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHA4P54764 RPS24P13-201ENST00000442520 397 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.82□□□□□ -1.48
EPHA4P54764 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHA4P54764 AC010655.1-201ENST00000449336 292 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 RPS20P21-201ENST00000466859 343 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 RN7SL269P-201ENST00000467795 305 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHA4P54764 AC004453.1-201ENST00000487895 408 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AOX3P-204ENST00000491025 2107 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EPHA4P54764 SNORD46.2-201ENST00000516021 102 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 RNU6-475P-201ENST00000516073 104 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.82□□□□□ -1.48
EPHA4P54764 OR4H6P-201ENST00000563771 921 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHA4P54764 AC020634.1-201ENST00000608701 549 ntBASIC5.82□□□□□ -1.48
EPHA4P54764 AC062037.2-201ENST00000610137 73 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms