Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MTCO2P32-201ENST00000514865 403 ntBASIC3.84□□□□□ -1.79
GPC3P51654 RNU2-27P-201ENST00000516185 142 ntBASIC3.84□□□□□ -1.79
GPC3P51654 IGKV2-26-201ENST00000518305 343 ntBASIC3.84□□□□□ -1.79
GPC3P51654 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.84□□□□□ -1.79
GPC3P51654 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
GPC3P51654 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.84□□□□□ -1.79
GPC3P51654 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.84□□□□□ -1.79
GPC3P51654 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.84□□□□□ -1.79
GPC3P51654 CYP2C60P-201ENST00000566088 139 ntBASIC3.84□□□□□ -1.79
GPC3P51654 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.84□□□□□ -1.79
GPC3P51654 AP002906.1-201ENST00000603405 233 ntBASIC3.84□□□□□ -1.79
GPC3P51654 AC009948.4-201ENST00000604692 675 ntBASIC3.84□□□□□ -1.79
GPC3P51654 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
GPC3P51654 AC092184.1-201ENST00000625042 715 ntBASIC3.84□□□□□ -1.79
GPC3P51654 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.84□□□□□ -1.79
GPC3P51654 AC068647.1-201ENST00000489539 2265 ntBASIC3.84□□□□□ -1.79
GPC3P51654 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GPC3P51654 SGO1P1-201ENST00000603525 1447 ntBASIC3.84□□□□□ -1.79
GPC3P51654 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
GPC3P51654 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
GPC3P51654 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
GPC3P51654 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.83□□□□□ -1.8
GPC3P51654 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
GPC3P51654 RNU6-263P-201ENST00000363811 107 ntBASIC3.83□□□□□ -1.8
GPC3P51654 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
GPC3P51654 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
GPC3P51654 RNU6-339P-201ENST00000384310 107 ntBASIC3.83□□□□□ -1.8
GPC3P51654 MIR16-1-201ENST00000385271 89 ntBASIC3.83□□□□□ -1.8
GPC3P51654 RNA5SP56-201ENST00000410277 118 ntBASIC3.83□□□□□ -1.8
GPC3P51654 RNU4-78P-201ENST00000410940 126 ntBASIC3.83□□□□□ -1.8
GPC3P51654 RPL30P2-201ENST00000414021 291 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AC007390.1-201ENST00000415722 356 ntBASIC3.83□□□□□ -1.8
GPC3P51654 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.83□□□□□ -1.8
GPC3P51654 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.83□□□□□ -1.8
GPC3P51654 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.83□□□□□ -1.8
GPC3P51654 AL590762.3-201ENST00000436372 640 ntBASIC3.83□□□□□ -1.8
GPC3P51654 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.83□□□□□ -1.8
GPC3P51654 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.83□□□□□ -1.8
GPC3P51654 AC007967.1-201ENST00000455422 1159 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AC008379.1-201ENST00000463655 464 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.83□□□□□ -1.8
GPC3P51654 AC093663.1-201ENST00000497190 394 ntBASIC3.83□□□□□ -1.8
GPC3P51654 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.83□□□□□ -1.8
GPC3P51654 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.83□□□□□ -1.8
GPC3P51654 OR4R2P-201ENST00000530815 597 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.83□□□□□ -1.8
GPC3P51654 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.83□□□□□ -1.8
GPC3P51654 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.83□□□□□ -1.8
GPC3P51654 AC011611.1-201ENST00000552179 197 ntBASIC3.83□□□□□ -1.8
GPC3P51654 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.83□□□□□ -1.8
GPC3P51654 NIFKP8-201ENST00000560500 874 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.83□□□□□ -1.8
GPC3P51654 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.83□□□□□ -1.8
GPC3P51654 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GPC3P51654 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.83□□□□□ -1.8
GPC3P51654 AC011468.4-201ENST00000603942 409 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AL354976.1-201ENST00000613843 387 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AL442067.2-201ENST00000614033 363 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AC008121.2-201ENST00000614647 523 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AP000720.1-201ENST00000625091 483 ntBASIC3.83□□□□□ -1.8
GPC3P51654 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.83□□□□□ -1.8
GPC3P51654 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.83□□□□□ -1.8
GPC3P51654 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.83□□□□□ -1.8
GPC3P51654 ZNF849P-201ENST00000594711 1566 ntBASIC3.83□□□□□ -1.8
GPC3P51654 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GPC3P51654 AL645937.1-201ENST00000641739 1652 ntBASIC3.83□□□□□ -1.8
GPC3P51654 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.83□□□□□ -1.8
GPC3P51654 MFSD8-233ENST00000641482 4860 ntBASIC3.82□□□□□ -1.8
GPC3P51654 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GPC3P51654 AC004925.1-201ENST00000624256 2706 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.82□□□□□ -1.8
GPC3P51654 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
GPC3P51654 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GPC3P51654 RNA5SP235-201ENST00000365411 114 ntBASIC3.82□□□□□ -1.8
GPC3P51654 RNU6-921P-201ENST00000384361 107 ntBASIC3.82□□□□□ -1.8
GPC3P51654 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GPC3P51654 AL121978.1-201ENST00000402778 359 ntBASIC3.82□□□□□ -1.8
GPC3P51654 RN7SKP111-201ENST00000410349 271 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.82□□□□□ -1.8
GPC3P51654 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.82□□□□□ -1.8
GPC3P51654 MTCO3P12-201ENST00000416718 547 ntBASIC3.82□□□□□ -1.8
GPC3P51654 TOMM22P1-201ENST00000418578 312 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AL049610.1-201ENST00000423374 372 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.82□□□□□ -1.8
GPC3P51654 AC005300.1-201ENST00000428401 373 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AC005326.1-201ENST00000429197 123 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.82□□□□□ -1.8
GPC3P51654 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.82□□□□□ -1.8
GPC3P51654 CDC42P1-201ENST00000456658 548 ntBASIC3.82□□□□□ -1.8
GPC3P51654 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.82□□□□□ -1.8
GPC3P51654 AC021146.1-201ENST00000511202 716 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.82□□□□□ -1.8
GPC3P51654 HIGD1AP10-201ENST00000527837 282 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.82□□□□□ -1.8
GPC3P51654 AC026333.2-201ENST00000542164 106 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.82□□□□□ -1.8
GPC3P51654 DUXAP6-201ENST00000553858 601 ntBASIC3.82□□□□□ -1.8
GPC3P51654 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.82□□□□□ -1.8
GPC3P51654 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.82□□□□□ -1.8
GPC3P51654 AC006254.3-201ENST00000603353 884 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms