Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SNRPA1P09661 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.13□□□□□ -1.59
SNRPA1P09661 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SNRPA1P09661 RNA5SP143-201ENST00000516936 115 ntBASIC5.13□□□□□ -1.59
SNRPA1P09661 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNRPA1P09661 CYCSP30-201ENST00000546447 172 ntBASIC5.13□□□□□ -1.59
SNRPA1P09661 TRAV15-201ENST00000556680 249 ntBASIC5.13□□□□□ -1.59
SNRPA1P09661 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNRPA1P09661 AC012360.2-201ENST00000609349 391 ntBASIC5.13□□□□□ -1.59
SNRPA1P09661 AC068944.2-201ENST00000610373 403 ntBASIC5.13□□□□□ -1.59
SNRPA1P09661 AL121772.2-201ENST00000614331 297 ntBASIC5.13□□□□□ -1.59
SNRPA1P09661 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNRPA1P09661 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.13□□□□□ -1.59
SNRPA1P09661 AC006927.3-201ENST00000638789 384 ntBASIC5.13□□□□□ -1.59
SNRPA1P09661 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.13□□□□□ -1.59
SNRPA1P09661 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNRPA1P09661 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.13□□□□□ -1.59
SNRPA1P09661 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNRPA1P09661 PABPC1P9-201ENST00000426076 1612 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 AC093535.2-201ENST00000624769 2326 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 RNA5SP399-201ENST00000364003 117 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.12□□□□□ -1.59
SNRPA1P09661 SUGT1P1-201ENST00000379514 476 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 MIR30B-201ENST00000384850 88 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SNRPA1P09661 RPL23AP29-201ENST00000397284 453 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 AC022028.1-201ENST00000412054 408 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.12□□□□□ -1.59
SNRPA1P09661 DYNLL1P7-201ENST00000429273 258 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 RPS24P8-201ENST00000431490 402 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 AL353597.2-202ENST00000434901 373 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.12□□□□□ -1.59
SNRPA1P09661 Z74696.2-201ENST00000436514 498 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 AC241584.1-201ENST00000438469 1241 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.12□□□□□ -1.59
SNRPA1P09661 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.12□□□□□ -1.59
SNRPA1P09661 MTND1P1-201ENST00000445453 368 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.12□□□□□ -1.59
SNRPA1P09661 COX6CP12-201ENST00000446748 202 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.12□□□□□ -1.59
SNRPA1P09661 FABP3P2-201ENST00000453169 399 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 RPL23AP12-201ENST00000467573 473 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 RPL21P6-201ENST00000479171 504 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 RN7SL323P-201ENST00000494712 295 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.12□□□□□ -1.59
SNRPA1P09661 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.12□□□□□ -1.59
SNRPA1P09661 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.12□□□□□ -1.59
SNRPA1P09661 AC010285.3-201ENST00000511668 676 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.12□□□□□ -1.59
SNRPA1P09661 RNU6-405P-201ENST00000516637 110 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 RNU6-352P-201ENST00000516908 107 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 DUXAP2-201ENST00000519198 589 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 COX6B1P6-201ENST00000522347 255 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.12□□□□□ -1.59
SNRPA1P09661 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.12□□□□□ -1.59
SNRPA1P09661 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.12□□□□□ -1.59
SNRPA1P09661 MIR432-201ENST00000606207 94 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 MIR6075-201ENST00000620782 95 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 AC025048.6-202ENST00000627667 438 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.12□□□□□ -1.59
SNRPA1P09661 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 CDR1-202ENST00000625883 1485 ntBASIC5.12□□□□□ -1.59
SNRPA1P09661 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNRPA1P09661 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNRPA1P09661 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNRPA1P09661 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SNRPA1P09661 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNRPA1P09661 RPL21P132-201ENST00000331267 462 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 RNA5SP124-201ENST00000362739 110 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 AC007066.1-201ENST00000392902 381 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SNRPA1P09661 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNRPA1P09661 AL512430.2-201ENST00000406786 339 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 RNU6-272P-201ENST00000411028 104 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 FCF1P9-201ENST00000412546 282 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 RAB9AP3-201ENST00000412737 573 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 AC093698.1-201ENST00000423843 571 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.11□□□□□ -1.59
SNRPA1P09661 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.11□□□□□ -1.59
SNRPA1P09661 GOT2P5-201ENST00000433995 546 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 AL450263.2-201ENST00000439400 589 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.11□□□□□ -1.59
SNRPA1P09661 RAB9AP1-201ENST00000449393 573 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.11□□□□□ -1.59
SNRPA1P09661 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.11□□□□□ -1.59
SNRPA1P09661 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.11□□□□□ -1.59
SNRPA1P09661 RPS20P21-201ENST00000466859 343 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 RN7SL271P-201ENST00000487601 295 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 PRELID3BP7-201ENST00000503606 469 ntBASIC5.11□□□□□ -1.59
SNRPA1P09661 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.11□□□□□ -1.59
SNRPA1P09661 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms