Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.86□□□□□ -1.47
GRIN3BO60391 AC087045.1-201ENST00000605856 382 ntBASIC5.86□□□□□ -1.47
GRIN3BO60391 AC011816.2-201ENST00000607089 556 ntBASIC5.86□□□□□ -1.47
GRIN3BO60391 AC069200.1-201ENST00000609511 323 ntBASIC5.86□□□□□ -1.47
GRIN3BO60391 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.86□□□□□ -1.47
GRIN3BO60391 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.86□□□□□ -1.47
GRIN3BO60391 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GRIN3BO60391 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.86□□□□□ -1.47
GRIN3BO60391 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
GRIN3BO60391 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GRIN3BO60391 ADAM24P-201ENST00000398655 2101 ntBASIC5.86□□□□□ -1.47
GRIN3BO60391 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GRIN3BO60391 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
GRIN3BO60391 OR14L1P-202ENST00000641545 3009 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.85□□□□□ -1.47
GRIN3BO60391 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.85□□□□□ -1.47
GRIN3BO60391 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.85□□□□□ -1.47
GRIN3BO60391 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
GRIN3BO60391 AL157700.1-201ENST00000561973 1432 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GRIN3BO60391 HSPA8P17-201ENST00000427029 1382 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GRIN3BO60391 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
GRIN3BO60391 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.85□□□□□ -1.47
GRIN3BO60391 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.85□□□□□ -1.47
GRIN3BO60391 RNU6-877P-201ENST00000383868 107 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 SNORA48.4-201ENST00000391089 134 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.85□□□□□ -1.47
GRIN3BO60391 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.85□□□□□ -1.47
GRIN3BO60391 COX6CP13-201ENST00000428703 226 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 RPEP2-201ENST00000432149 701 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.85□□□□□ -1.47
GRIN3BO60391 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.85□□□□□ -1.47
GRIN3BO60391 BX322784.1-201ENST00000455793 1077 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 RN7SL814P-201ENST00000487715 300 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 AC007182.2-201ENST00000489251 402 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 AC073073.1-201ENST00000493920 463 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 AC114967.1-201ENST00000504890 259 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 AC091868.1-201ENST00000508746 304 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
GRIN3BO60391 SCARNA15.1-201ENST00000516384 125 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.85□□□□□ -1.47
GRIN3BO60391 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.85□□□□□ -1.47
GRIN3BO60391 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.85□□□□□ -1.47
GRIN3BO60391 MTND1P35-201ENST00000526739 508 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 OR8L1P-201ENST00000534005 955 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
GRIN3BO60391 AL845331.3-202ENST00000562856 261 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.85□□□□□ -1.47
GRIN3BO60391 MIR4286-201ENST00000580651 93 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.85□□□□□ -1.47
GRIN3BO60391 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.85□□□□□ -1.47
GRIN3BO60391 AC055876.5-201ENST00000605667 259 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GRIN3BO60391 AC093838.1-201ENST00000613014 469 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 AC074140.1-201ENST00000621617 208 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.85□□□□□ -1.47
GRIN3BO60391 U6.101-201ENST00000637707 76 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
GRIN3BO60391 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GRIN3BO60391 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
GRIN3BO60391 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GRIN3BO60391 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.85□□□□□ -1.47
GRIN3BO60391 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GRIN3BO60391 MTND5P17-201ENST00000418405 1603 ntBASIC5.85□□□□□ -1.47
GRIN3BO60391 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
GRIN3BO60391 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 CCT4P2-201ENST00000233836 1548 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.84□□□□□ -1.47
GRIN3BO60391 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
GRIN3BO60391 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
GRIN3BO60391 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 SNORA9-201ENST00000384215 133 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 MT-TD-201ENST00000387419 68 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 ARL4AP5-201ENST00000404372 599 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 RNU6-195P-201ENST00000411352 109 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 MTND3P17-201ENST00000416968 344 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.84□□□□□ -1.47
GRIN3BO60391 AL354766.1-201ENST00000423396 542 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AL589872.1-201ENST00000426602 288 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 RPL7P2-201ENST00000427639 268 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AC133104.1-201ENST00000429100 218 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 MTCO2P11-201ENST00000431069 680 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.84□□□□□ -1.47
GRIN3BO60391 ATP5HP2-201ENST00000433885 485 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 RPL22P17-201ENST00000438729 315 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.84□□□□□ -1.47
GRIN3BO60391 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.84□□□□□ -1.47
GRIN3BO60391 AC132479.1-201ENST00000449160 144 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.84□□□□□ -1.47
GRIN3BO60391 RPL7P22-201ENST00000466005 733 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.84□□□□□ -1.47
GRIN3BO60391 RPL23AP2-201ENST00000471227 466 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AL132838.2-201ENST00000492041 314 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms