Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.92□□□□□ -1.62
PRPF3O43395 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF3O43395 AC141257.3-201ENST00000572906 215 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF3O43395 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 MIR3138-201ENST00000585238 82 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF3O43395 AC008507.1-201ENST00000587506 734 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AC040904.1-201ENST00000590850 223 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF3O43395 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 AL158196.1-201ENST00000616786 434 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.92□□□□□ -1.62
PRPF3O43395 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 ZNF833P-201ENST00000424938 1494 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF3O43395 AC092447.10-201ENST00000620607 1652 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF3O43395 OR11H5P-202ENST00000641612 1325 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF3O43395 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PRPF3O43395 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF3O43395 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF3O43395 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF3O43395 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF3O43395 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF3O43395 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PRPF3O43395 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PRPF3O43395 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
PRPF3O43395 RN7SKP182-201ENST00000410772 298 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 RPS12P23-201ENST00000419579 400 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF3O43395 AC016712.1-201ENST00000431088 378 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF3O43395 AL512286.1-201ENST00000439244 400 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF3O43395 BMI1P1-201ENST00000445879 941 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 RPL36AP33-201ENST00000450395 310 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AL162388.1-201ENST00000450912 352 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF3O43395 snoU13.8-201ENST00000458890 104 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC091564.1-201ENST00000464563 479 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 RPL5P30-201ENST00000465511 891 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC017015.1-201ENST00000477387 286 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF3O43395 AC091167.1-201ENST00000492017 396 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF3O43395 KCTD9P2-201ENST00000512203 1013 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF3O43395 IGKV2D-36-201ENST00000518643 226 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF3O43395 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF3O43395 AL139174.1-201ENST00000531489 886 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AP004247.1-201ENST00000531556 1289 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.91□□□□□ -1.62
PRPF3O43395 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF3O43395 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF3O43395 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF3O43395 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF3O43395 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.91□□□□□ -1.62
PRPF3O43395 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF3O43395 AC107954.1-201ENST00000565906 727 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF3O43395 AP005136.1-201ENST00000579765 429 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF3O43395 AL161729.3-201ENST00000603533 673 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC010680.3-201ENST00000604215 520 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 LINC00901.1-201ENST00000617252 152 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 Z69908.1-201ENST00000622603 247 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 MIR6810-201ENST00000622701 70 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC055839.1-201ENST00000634467 498 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 AC068137.4-201ENST00000638485 296 ntBASIC4.91□□□□□ -1.62
PRPF3O43395 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PRPF3O43395 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF3O43395 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF3O43395 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.9□□□□□ -1.62
PRPF3O43395 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PRPF3O43395 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PRPF3O43395 RNU1-108P-201ENST00000362556 161 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 RNU6-359P-201ENST00000365466 108 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 MT-TH-201ENST00000387441 69 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 U3.29-201ENST00000391296 212 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF3O43395 CHIAP3-201ENST00000423668 1133 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 BX119904.4-201ENST00000424402 301 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF3O43395 GSTA7P-201ENST00000438425 448 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.9□□□□□ -1.63
PRPF3O43395 COX6CP2-201ENST00000444980 225 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 Z95327.1-201ENST00000446082 482 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 AC009220.1-201ENST00000451614 275 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms