Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SOX1O00570 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SOX1O00570 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.7□□□□□ -1.5
SOX1O00570 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 AP001350.1-201ENST00000601906 1524 ntBASIC5.7□□□□□ -1.5
SOX1O00570 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX1O00570 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SOX1O00570 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX1O00570 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 MIR105-1-201ENST00000385222 81 ntBASIC5.7□□□□□ -1.5
SOX1O00570 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.7□□□□□ -1.5
SOX1O00570 RNA5SP44-201ENST00000410446 133 ntBASIC5.7□□□□□ -1.5
SOX1O00570 RNU4-14P-201ENST00000410858 122 ntBASIC5.7□□□□□ -1.5
SOX1O00570 RN7SKP100-201ENST00000411258 284 ntBASIC5.7□□□□□ -1.5
SOX1O00570 ARL5AP1-201ENST00000418991 388 ntBASIC5.7□□□□□ -1.5
SOX1O00570 DDX39BP1-205ENST00000422507 192 ntBASIC5.7□□□□□ -1.5
SOX1O00570 EI24P4-201ENST00000423683 1078 ntBASIC5.7□□□□□ -1.5
SOX1O00570 AC005517.2-201ENST00000424673 553 ntBASIC5.7□□□□□ -1.5
SOX1O00570 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
SOX1O00570 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX1O00570 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX1O00570 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX1O00570 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX1O00570 AL133244.1-201ENST00000456007 258 ntBASIC5.7□□□□□ -1.5
SOX1O00570 AC010618.1-201ENST00000469924 477 ntBASIC5.7□□□□□ -1.5
SOX1O00570 RPL23AP11-201ENST00000475260 469 ntBASIC5.7□□□□□ -1.5
SOX1O00570 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX1O00570 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX1O00570 AC018797.3-201ENST00000513388 1241 ntBASIC5.7□□□□□ -1.5
SOX1O00570 AC006427.1-201ENST00000514359 712 ntBASIC5.7□□□□□ -1.5
SOX1O00570 AC093303.1-201ENST00000514549 295 ntBASIC5.7□□□□□ -1.5
SOX1O00570 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX1O00570 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX1O00570 RNU6-864P-201ENST00000516256 108 ntBASIC5.7□□□□□ -1.5
SOX1O00570 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX1O00570 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.7□□□□□ -1.5
SOX1O00570 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX1O00570 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX1O00570 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX1O00570 OR4H6P-201ENST00000563771 921 ntBASIC5.7□□□□□ -1.5
SOX1O00570 MIR132-201ENST00000591554 101 ntBASIC5.7□□□□□ -1.5
SOX1O00570 RPL23AP92-201ENST00000603609 255 ntBASIC5.7□□□□□ -1.5
SOX1O00570 AL022099.1-201ENST00000604551 712 ntBASIC5.7□□□□□ -1.5
SOX1O00570 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX1O00570 AC011373.1-201ENST00000607270 237 ntBASIC5.7□□□□□ -1.5
SOX1O00570 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX1O00570 CYP3A51P-201ENST00000633513 256 ntBASIC5.7□□□□□ -1.5
SOX1O00570 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX1O00570 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX1O00570 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX1O00570 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX1O00570 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX1O00570 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX1O00570 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.69□□□□□ -1.5
SOX1O00570 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SOX1O00570 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
SOX1O00570 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SOX1O00570 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX1O00570 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX1O00570 RNA5SP387-201ENST00000364226 106 ntBASIC5.69□□□□□ -1.5
SOX1O00570 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX1O00570 RNU6-1207P-201ENST00000384343 107 ntBASIC5.69□□□□□ -1.5
SOX1O00570 AL024474.1-201ENST00000404655 591 ntBASIC5.69□□□□□ -1.5
SOX1O00570 GPS2P1-201ENST00000411761 986 ntBASIC5.69□□□□□ -1.5
SOX1O00570 RPS17P17-201ENST00000419392 409 ntBASIC5.69□□□□□ -1.5
SOX1O00570 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX1O00570 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX1O00570 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX1O00570 RPL12P17-201ENST00000432393 498 ntBASIC5.69□□□□□ -1.5
SOX1O00570 SNRPEP4-201ENST00000435815 279 ntBASIC5.69□□□□□ -1.5
SOX1O00570 AC096775.1-201ENST00000437724 448 ntBASIC5.69□□□□□ -1.5
SOX1O00570 AC108734.1-201ENST00000439549 399 ntBASIC5.69□□□□□ -1.5
SOX1O00570 HMGB3P22-202ENST00000451823 572 ntBASIC5.69□□□□□ -1.5
SOX1O00570 NANOGP10-201ENST00000453325 895 ntBASIC5.69□□□□□ -1.5
SOX1O00570 AC010326.1-201ENST00000462726 602 ntBASIC5.69□□□□□ -1.5
SOX1O00570 RPL7L1P8-201ENST00000469911 741 ntBASIC5.69□□□□□ -1.5
SOX1O00570 RPL21P6-201ENST00000479171 504 ntBASIC5.69□□□□□ -1.5
SOX1O00570 Y_RNA.682-201ENST00000516457 100 ntBASIC5.69□□□□□ -1.5
SOX1O00570 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX1O00570 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX1O00570 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX1O00570 COX6CP5-201ENST00000527162 228 ntBASIC5.69□□□□□ -1.5
SOX1O00570 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX1O00570 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX1O00570 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX1O00570 AC005341.1-201ENST00000571086 708 ntBASIC5.69□□□□□ -1.5
SOX1O00570 MIR3149-201ENST00000584629 83 ntBASIC5.69□□□□□ -1.5
SOX1O00570 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX1O00570 AL355816.1-201ENST00000607951 118 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms