Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC093536.2-201ENST00000565257 1406 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 RNA5SP124-201ENST00000362739 110 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 MIR490-201ENST00000384865 128 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AL356057.2-201ENST00000403318 432 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AL050321.1-201ENST00000432363 400 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC098826.1-201ENST00000433943 471 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC093156.1-201ENST00000440382 670 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC037198.2-201ENST00000478845 733 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC090096.1-201ENST00000489168 390 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 TTC39CP1-201ENST00000512513 755 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC112673.1-201ENST00000513168 575 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 IGLV3-17-201ENST00000519099 244 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC010306.1-201ENST00000523223 1117 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC009303.3-201ENST00000591103 736 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AC019159.1-201ENST00000605094 187 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 MIR6895-201ENST00000613497 78 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 AL365361.1-201ENST00000566942 3481 ntBASIC1.78□□□□□ -2.12
LINC01549A6NIU2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LINC01549A6NIU2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 MTND4P1-201ENST00000457501 1466 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AL139276.1-201ENST00000311910 1001 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 MIR554-201ENST00000384874 96 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 DHFRP5-201ENST00000406944 564 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 MIR1289-1-201ENST00000408836 144 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 FNDC3CP-201ENST00000420795 1155 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC005326.1-201ENST00000429197 123 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AL159987.2-201ENST00000432754 307 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC091862.1-201ENST00000438016 1100 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AL031659.1-201ENST00000447075 539 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 CACYBPP2-201ENST00000453625 678 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC008280.2-201ENST00000455473 307 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC133134.1-201ENST00000466800 359 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC020898.1-201ENST00000474167 787 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 RNU6-711P-201ENST00000517255 106 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC068714.1-201ENST00000559623 800 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC105137.2-201ENST00000569073 466 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 MIR3160-1-201ENST00000577972 85 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC010928.3-201ENST00000587712 541 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC093227.2-201ENST00000589357 285 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 RNA5SP108-201ENST00000605921 117 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AC006249.1-201ENST00000621223 471 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 AL355480.1-201ENST00000629041 99 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
LINC01549A6NIU2 CUL1P1-201ENST00000509510 2425 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 PABPC1P9-201ENST00000426076 1612 ntBASIC1.77□□□□□ -2.13
LINC01549A6NIU2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AP002907.1-201ENST00000606361 1430 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 RNU6-301P-201ENST00000384277 107 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AL138885.1-201ENST00000405921 675 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 RPS4XP7-201ENST00000406274 780 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC022022.1-201ENST00000430304 178 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 RPS24P8-201ENST00000431490 402 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 RPL37P1-201ENST00000432310 284 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 ATP5F1P1-201ENST00000433775 569 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 RPL37P4-201ENST00000448908 268 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 HMGB1P3-201ENST00000502802 616 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 WBP1LP4-201ENST00000505043 344 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC096725.1-201ENST00000514266 313 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC021733.2-201ENST00000518830 497 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC022790.1-201ENST00000522872 204 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AP000790.1-201ENST00000528891 737 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 OR4R2P-201ENST00000530815 597 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC007115.1-201ENST00000546853 234 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 MIR3690-201ENST00000580266 75 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 MIR5694-201ENST00000581190 76 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms