Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AP003355.3-201ENST00000623465 114 ntBASIC3.05□□□□□ -1.92
RHBDD3Q9Y3P4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.05□□□□□ -1.92
RHBDD3Q9Y3P4 AC090740.1-201ENST00000623193 2262 ntBASIC3.05□□□□□ -1.92
RHBDD3Q9Y3P4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RHBDD3Q9Y3P4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RHBDD3Q9Y3P4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 SNORD56.4-201ENST00000363883 71 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 RNU6-1005P-201ENST00000384519 107 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AL121978.1-201ENST00000402778 359 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 LIPT1P1-201ENST00000415870 1186 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 DBIP2-201ENST00000419076 262 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 TXNP1-201ENST00000441872 371 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AL929288.2-201ENST00000446368 407 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 SNORA70.18-201ENST00000516696 98 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AC104229.1-201ENST00000561364 255 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 BPTFP1-201ENST00000579209 492 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AL133393.1-201ENST00000603277 287 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 RMST_10.1-201ENST00000616309 154 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AC006213.5-201ENST00000619673 288 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 MIR7153-201ENST00000637758 57 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AC132825.7-201ENST00000638744 335 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AL356274.2-201ENST00000624379 3752 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AC092435.3-201ENST00000565538 3654 ntBASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.04□□□□□ -1.92
RHBDD3Q9Y3P4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 MFSD8-233ENST00000641482 4860 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 RPL21P17-201ENST00000397467 475 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 CYCSP19-201ENST00000411715 316 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 HSPE1P1-201ENST00000421494 318 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 RPL31P12-201ENST00000422587 358 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 NIPA2P1-201ENST00000426223 976 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 ZFAND6P1-201ENST00000434138 605 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AL357552.1-201ENST00000445254 415 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC140076.1-201ENST00000449897 361 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 TRBV26-201ENST00000456572 344 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC010468.1-201ENST00000461022 817 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 HMGB1P25-201ENST00000468402 607 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC087312.1-201ENST00000471411 480 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC023598.1-201ENST00000472521 361 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 CYCSP20-201ENST00000473154 315 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AL136126.1-201ENST00000473603 402 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 ACTR3P3-201ENST00000480448 893 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC068724.1-201ENST00000487100 792 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 SNORA31.1-201ENST00000515993 133 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 SNORA31.5-201ENST00000516190 133 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 SNORA31.8-201ENST00000516327 108 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC022690.1-201ENST00000526681 550 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AP000619.3-201ENST00000535634 1127 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC106785.1-201ENST00000565935 262 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC092474.3-201ENST00000603022 568 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC010591.1-201ENST00000603941 649 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AC008962.1-201ENST00000605729 304 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AL450270.1-201ENST00000606160 391 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AL121772.2-201ENST00000614331 297 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 AL731566.2-201ENST00000618971 317 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 U4.6-201ENST00000621618 127 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 MAPK10-322ENST00000641485 4530 ntBASIC3.03□□□□□ -1.92
RHBDD3Q9Y3P4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms