Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 AC083760.1-201ENST00000589621 670 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 RNA5SP289-201ENST00000362332 137 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 ARF4P3-201ENST00000397387 509 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 OR6C72P-201ENST00000451403 892 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 SNX5P1-201ENST00000505757 1041 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC005921.1-201ENST00000510589 286 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 RPL12P22-201ENST00000519073 490 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 ELOCP31-201ENST00000540463 467 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 RN7SKP222-201ENST00000410651 315 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 RNA5SP498-201ENST00000411342 120 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC003982.1-202ENST00000469928 248 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 KC877373.1-201ENST00000479066 408 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC108860.1-201ENST00000484521 383 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC234778.2-201ENST00000566241 354 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC010680.4-201ENST00000605334 543 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 RPL23AP61-201ENST00000623642 466 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AC092593.1-201ENST00000515413 1815 ntBASIC2.66□□□□□ -1.98
CCDC88CQ9P219 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.65□□□□□ -1.98
CCDC88CQ9P219 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CCDC88CQ9P219 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 SNORA25.6-201ENST00000364121 118 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 RNU6-851P-201ENST00000384565 107 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 MTND4LP20-201ENST00000402379 270 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 MTCYBP7-201ENST00000419540 1134 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 VDAC1P3-201ENST00000434069 851 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 BUD31P2-201ENST00000449374 300 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 SNRPGP3-201ENST00000469405 227 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 LARP7P4-201ENST00000481075 878 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AC021087.2-201ENST00000504656 1203 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AC108471.1-201ENST00000513977 287 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AP002404.1-201ENST00000532005 451 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AC007954.1-201ENST00000554198 494 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AC007687.1-201ENST00000602704 304 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 CR381653.2-201ENST00000624041 768 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC88CQ9P219 API5P2-201ENST00000397055 1498 ntBASIC2.65□□□□□ -1.99
CCDC88CQ9P219 SNORA70E-201ENST00000384492 135 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 RNA5SP21-201ENST00000410917 96 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 TRIAP1P1-201ENST00000427062 225 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 MTCO3P17-201ENST00000443775 513 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC078817.1-201ENST00000492623 435 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AP001960.1-201ENST00000506494 658 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AP005212.4-201ENST00000614206 710 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 MIR4278-201ENST00000636094 69 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 SEPT7P7-201ENST00000420492 1301 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AL118496.1-201ENST00000440201 1812 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms