Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC008015.1-201ENST00000555505 465 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 GTF2IP8-201ENST00000560687 584 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL132657.2-201ENST00000564417 358 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC067852.3-201ENST00000589177 561 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL390838.2-201ENST00000602394 274 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC123786.2-201ENST00000603459 275 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL031281.1-201ENST00000604049 488 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL121772.2-201ENST00000614331 297 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 MIR3974-201ENST00000637126 96 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 SGO1P2-201ENST00000429458 1589 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 RNA5SP124-201ENST00000362739 110 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 RNU6-582P-201ENST00000362989 107 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 RNU5A-2P-201ENST00000384337 116 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 SNORD116-23-201ENST00000384645 92 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 RNU6-1300P-201ENST00000391046 108 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 ATP5F1P3-201ENST00000397213 657 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC068533.1-201ENST00000418542 415 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 USP9YP26-201ENST00000421008 661 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC011233.1-201ENST00000422812 283 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 RPS20P1-201ENST00000434853 354 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 YWHAZP7-201ENST00000436906 631 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 RPL7P28-201ENST00000437739 740 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 MTND5P2-201ENST00000442927 1142 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 RN7SL132P-201ENST00000478131 296 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC109445.1-201ENST00000512356 383 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 MTCO1P47-201ENST00000523889 1271 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC087373.1-201ENST00000524920 491 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 Z94722.1-201ENST00000604328 474 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC131235.4-201ENST00000609288 620 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 VIS1.1-201ENST00000610517 203 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC073348.1-201ENST00000623002 331 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC068620.4-201ENST00000636730 1182 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 DBF4P1-201ENST00000412976 1892 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 AC022893.2-201ENST00000564832 3296 ntBASIC3.81□□□□□ -1.8
SIX2Q9NPC8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SIX2Q9NPC8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 FRG1CP-201ENST00000358464 769 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 MIR30E-201ENST00000362104 92 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 RNU5D-1-201ENST00000363299 116 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 TAF9BP1-201ENST00000396646 746 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC090960.1-201ENST00000421072 306 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC009965.2-201ENST00000425328 970 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AL158071.1-201ENST00000430315 461 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 RPS3AP46-201ENST00000448352 682 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AL034418.1-201ENST00000448675 860 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 PPIAP3-201ENST00000450588 505 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 RPS4XP2-201ENST00000458402 793 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 RPL7P18-201ENST00000478965 734 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC126121.1-201ENST00000482313 553 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC010587.2-201ENST00000511727 448 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 RN7SKP31-201ENST00000516354 278 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC105185.1-201ENST00000518705 535 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AP001207.1-201ENST00000524051 481 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms