Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC122133.1-201ENST00000613964 233 ntBASIC4.06□□□□□ -1.76
BRF2Q9HAW0 AL031667.3-201ENST00000620124 655 ntBASIC4.06□□□□□ -1.76
BRF2Q9HAW0 AC079248.2-201ENST00000623779 326 ntBASIC4.06□□□□□ -1.76
BRF2Q9HAW0 AC091925.2-201ENST00000625059 256 ntBASIC4.06□□□□□ -1.76
BRF2Q9HAW0 CRYM-AS1-204ENST00000637983 556 ntBASIC4.06□□□□□ -1.76
BRF2Q9HAW0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
BRF2Q9HAW0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BRF2Q9HAW0 AC116096.1-201ENST00000566804 2314 ntBASIC4.06□□□□□ -1.76
BRF2Q9HAW0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC011477.1-204ENST00000623416 1325 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC103591.2-201ENST00000265259 766 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 RNU6-28P-201ENST00000362378 107 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL583835.1-201ENST00000399570 407 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 RN7SKP235-201ENST00000410662 305 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL590233.1-201ENST00000430017 456 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 RPS29P17-201ENST00000430795 166 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC016712.1-201ENST00000431088 378 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 MUPP-201ENST00000438111 566 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 PAXBP1P1-201ENST00000449315 447 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 ARPC3P2-201ENST00000457786 533 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 RPL23AP24-201ENST00000458203 385 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 RPS29P19-201ENST00000479709 171 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC007686.1-201ENST00000488511 463 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 RN7SL691P-201ENST00000494487 301 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 HSPE1P23-201ENST00000509838 286 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 MTND1P22-201ENST00000510572 951 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 MTND5P4-201ENST00000514978 288 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC068831.4-201ENST00000556118 109 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC020914.6-201ENST00000594327 272 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC064801.1-201ENST00000612025 407 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL445264.1-201ENST00000621719 171 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL445363.3-201ENST00000623080 671 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL356596.1-201ENST00000624230 379 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AP005264.7-201ENST00000625003 745 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AC112200.1-201ENST00000625015 234 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL158163.1-201ENST00000603915 1649 ntBASIC4.05□□□□□ -1.76
BRF2Q9HAW0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.05□□□□□ -1.76
BRF2Q9HAW0 AL022578.1-201ENST00000439330 1433 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC004925.1-201ENST00000624256 2706 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 SNORA31-201ENST00000362607 130 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 RNA5SP88-201ENST00000365560 109 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 RHOT1P2-201ENST00000366423 333 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 SNORD116-8-201ENST00000384365 95 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 MIR93-201ENST00000385024 80 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 MIR607-201ENST00000385241 96 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 CYB5AP4-201ENST00000396692 399 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 MIR320C1-201ENST00000408566 88 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC099677.1-201ENST00000420575 175 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AL590103.1-201ENST00000434488 307 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 EEF1E1P1-201ENST00000446998 430 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 snoU13.1-201ENST00000459157 104 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AP001992.1-205ENST00000462248 379 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC017015.1-201ENST00000477387 286 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 COX7A2P2-201ENST00000505291 250 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC024589.1-201ENST00000512207 263 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 COX6CP8-201ENST00000522620 226 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 TRAV8-5-201ENST00000537369 341 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC090888.1-201ENST00000561335 1141 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 KPNA2P3-201ENST00000584190 848 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms