Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
POLR1BQ9H9Y6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
POLR1BQ9H9Y6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.12□□□□□ -1.75
POLR1BQ9H9Y6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.12□□□□□ -1.75
POLR1BQ9H9Y6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
POLR1BQ9H9Y6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
POLR1BQ9H9Y6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 RLIMP1-201ENST00000339626 1680 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 SNORA70.4-201ENST00000365509 134 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 RNU6-339P-201ENST00000384310 107 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 MIR200C-201ENST00000384980 68 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 MTND4LP20-201ENST00000402379 270 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 RNA5SP36-201ENST00000410197 133 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 RN7SKP235-201ENST00000410662 305 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 RPS20P14-201ENST00000412545 360 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 TPT1P2-201ENST00000413105 503 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AL157831.1-201ENST00000426134 473 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 MTCYBP34-201ENST00000439552 670 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 UBE2V1P3-201ENST00000439651 417 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 HMGB3P22-202ENST00000451823 572 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 USP9YP34-201ENST00000453983 808 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 RPL7P22-201ENST00000466005 733 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 RPL7L1P8-201ENST00000469911 741 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC068587.2-201ENST00000478386 781 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC012170.1-201ENST00000495139 359 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC108078.3-201ENST00000502633 489 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC010460.1-201ENST00000507087 466 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 RNA5SP519-201ENST00000516480 119 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 RN7SKP116-201ENST00000516902 319 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC107016.1-201ENST00000550463 337 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC008739.3-201ENST00000603262 127 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AL139286.1-201ENST00000604465 483 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AL021997.2-201ENST00000615674 271 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC073968.1-201ENST00000618594 637 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 AC007546.1-201ENST00000619452 559 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 DCAF13P1-201ENST00000495256 1330 ntBASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
POLR1BQ9H9Y6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 RNU6-374P-201ENST00000364146 108 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 SNORA11.1-201ENST00000408133 129 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 RN7SKP182-201ENST00000410772 298 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 MTCYBP38-201ENST00000417160 1123 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC012065.2-201ENST00000421295 375 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 OR8F1P-201ENST00000425243 930 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AL035410.1-201ENST00000427409 427 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 CETN4P-201ENST00000432407 469 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 RPS29P7-201ENST00000439662 171 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC104978.1-201ENST00000449387 391 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC097493.1-201ENST00000463958 372 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC091564.1-201ENST00000464563 479 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 PLGLA-201ENST00000465668 449 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 MTCYBP17-201ENST00000503579 789 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC017037.1-201ENST00000508460 471 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 XKRY-201ENST00000510392 1100 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC006499.2-201ENST00000513470 337 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 RNY4P37-201ENST00000516225 96 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AC104986.1-201ENST00000517978 436 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 IGKV2D-36-201ENST00000518643 226 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 DEFB131D-201ENST00000526803 184 ntBASIC4.1□□□□□ -1.75
POLR1BQ9H9Y6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms