Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 BNIP3P6-201ENST00000549284 499 ntBASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 AC105224.1-201ENST00000587055 421 ntBASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 GLUD1P4-201ENST00000590914 418 ntBASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 SUMO2P15-201ENST00000604285 278 ntBASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 AC109583.2-201ENST00000617367 129 ntBASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 AC068831.8-201ENST00000620171 435 ntBASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 AC009902.3-201ENST00000606235 2172 ntBASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 AL118496.1-201ENST00000440201 1812 ntBASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD1Q96NR3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 ASNSP3-201ENST00000451989 1306 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 OR1S2-201ENST00000302592 978 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 RNY3P13-201ENST00000365542 102 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 Y_RNA.384-201ENST00000383909 102 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 RNA5SP187-201ENST00000384400 119 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 RNA5SP339-201ENST00000390987 122 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 PPIAP9-201ENST00000403866 498 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AL356967.1-201ENST00000406305 431 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 RNA5SP487-201ENST00000410186 122 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC004987.3-201ENST00000413879 771 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 MTCYBP8-201ENST00000422855 651 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AL356276.2-201ENST00000435919 558 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC104308.1-201ENST00000454621 333 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 UBA52P7-201ENST00000486088 380 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC096576.1-201ENST00000489014 359 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC024558.1-201ENST00000505008 528 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 PGAM1P13-201ENST00000507497 754 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 SNORD27.1-201ENST00000516319 72 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 IGLV2-28-201ENST00000520681 304 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 OR5BN1P-201ENST00000532955 829 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC090022.1-201ENST00000546569 311 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 MIR1269B-201ENST00000580405 75 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC087763.1-201ENST00000603391 286 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC123786.2-201ENST00000603459 275 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 LLPHP1-201ENST00000603571 367 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AL360085.1-201ENST00000604713 532 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AL512329.2-201ENST00000607350 548 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC090948.1-201ENST00000607464 549 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC104237.2-201ENST00000612456 443 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC123768.4-201ENST00000616244 701 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AL049794.2-201ENST00000616301 365 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 MIR6864-201ENST00000617935 70 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC079684.1-201ENST00000621405 437 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC006210.2-201ENST00000367074 1545 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 AC009229.4-201ENST00000623854 1947 ntBASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD1Q96NR3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AL078621.3-201ENST00000623707 2042 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 AP000756.2-201ENST00000624168 2567 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 RNU5E-8P-201ENST00000363502 116 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 SNORD82-201ENST00000365530 70 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 Y_RNA.367-201ENST00000365544 101 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 Y_RNA.474-201ENST00000384341 102 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 SNORA67-201ENST00000384423 137 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 SNORD37.1-201ENST00000390968 65 ntBASIC5.04□□□□□ -1.6
PTCHD1Q96NR3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms