Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 OR52B1P-201ENST00000316506 909 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 SNORA71.2-201ENST00000364941 134 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RNU6-744P-201ENST00000365557 107 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RNU6-1316P-201ENST00000384242 108 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 FCF1P10-201ENST00000407590 479 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 Y_RNA.625-201ENST00000411256 107 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 VDAC1P9-201ENST00000412766 841 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 MTND4LP11-201ENST00000422184 280 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 GLRXP1-201ENST00000423261 334 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RPL30P3-201ENST00000424262 333 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 MRPS10P2-201ENST00000431226 381 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RSU1P2-202ENST00000437884 485 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 DNAJC19P4-201ENST00000440115 345 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 PGBD4P3-201ENST00000440731 581 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RN7SL738P-201ENST00000470264 297 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC004924.1-201ENST00000480160 781 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC093267.1-201ENST00000489176 961 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC022483.1-201ENST00000514020 567 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RNU6-314P-201ENST00000516574 104 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 MTCO2P4-201ENST00000517968 247 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AP003467.2-201ENST00000520175 319 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC134698.4-201ENST00000523451 826 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 OR5AN2P-201ENST00000534535 896 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AP005119.2-201ENST00000579735 1105 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RN7SL52P-201ENST00000584271 284 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RPL7P50-201ENST00000600588 727 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC007566.2-201ENST00000603642 413 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AP000860.1-201ENST00000605250 559 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 LINC00901.1-201ENST00000617252 152 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RN7SL722P-201ENST00000617780 284 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 RN7SL565P-201ENST00000618246 284 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC140113.4-201ENST00000622087 222 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AP000346.3-201ENST00000622821 210 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 OR5H6-203ENST00000642105 978 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 DHX40P1-201ENST00000588725 1412 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC108467.2-201ENST00000617640 1597 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AL049780.3-201ENST00000624612 1583 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 SAGE4P-201ENST00000442271 3381 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 CCT4P2-201ENST00000233836 1548 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 CPHL1P-201ENST00000461341 3407 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AL031595.2-201ENST00000624215 19071 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 OR4K15-201ENST00000305051 1216 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 RN7SKP226-201ENST00000364912 300 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 RNA5SP151-201ENST00000365632 117 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 DDX18P3-201ENST00000404856 2007 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 SPA17P1-201ENST00000416656 452 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 RPL31P45-201ENST00000419532 356 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 MTND6P18-201ENST00000439477 513 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 SDCBPP1-201ENST00000440192 890 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 MTND6P13-201ENST00000443510 523 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 FAM103A2P-201ENST00000444122 354 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 RPL23AP72-201ENST00000492447 435 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 RPL9P6-201ENST00000492764 598 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 212.9 ms