Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC091903.1-201ENST00000624322 454 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AL645568.2-201ENST00000432815 1337 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 ZNF807-201ENST00000328088 1707 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 MAPK10-322ENST00000641485 4530 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AL356274.2-201ENST00000624379 3752 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC016716.1-201ENST00000265882 708 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RNA5SP119-201ENST00000362715 117 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RNU6-263P-201ENST00000363811 107 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 MIR23B-201ENST00000384832 97 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RPL5P18-201ENST00000406671 891 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 MTCO3P12-201ENST00000416718 547 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC091286.1-201ENST00000431233 461 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 OR2B8P-201ENST00000432841 938 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 SETP8-201ENST00000435341 628 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RPS26P56-201ENST00000444468 240 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 Z95327.1-201ENST00000446082 482 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC092685.1-201ENST00000447960 1243 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RPL7P15-201ENST00000461190 712 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC073522.1-201ENST00000483312 377 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC108860.1-201ENST00000484521 383 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RPL21P129-201ENST00000491732 478 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC090543.1-201ENST00000492168 485 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC111000.2-201ENST00000507775 550 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 SNORA31.1-201ENST00000515993 133 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RNU6-760P-201ENST00000516078 97 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 SNORA31.5-201ENST00000516190 133 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 SNORA31.13-201ENST00000516624 135 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC026403.1-201ENST00000518938 295 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AP001207.2-201ENST00000519490 539 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 C1DP5-201ENST00000525775 383 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC007458.1-201ENST00000542812 373 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 MIR4276-201ENST00000584832 70 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC113368.1-201ENST00000603736 382 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC011374.2-201ENST00000607135 526 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC090617.7-201ENST00000623952 126 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AC244258.1-201ENST00000637553 1071 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 AL161912.2-201ENST00000565707 3007 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.12□□□□□ -1.91
CLHC1Q8NHS4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 ZNF734P-201ENST00000419494 1534 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 MIR490-201ENST00000384865 128 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 MIR134-201ENST00000385258 73 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 RPL31P1-201ENST00000398116 372 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 RN7SKP111-201ENST00000410349 271 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 RNU4-78P-201ENST00000410940 126 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 VTA1P1-201ENST00000414044 866 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 RPL36AP36-201ENST00000418616 301 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC244453.4-201ENST00000419150 388 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 HMGN2P31-201ENST00000432430 273 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 TPTE2P1-204ENST00000435256 593 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 Z99127.3-201ENST00000448158 395 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 OR52A4P-203ENST00000498233 1014 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms