Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.88□□□□□ -1.79
SHFQ7M4L6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.88□□□□□ -1.79
SHFQ7M4L6 AP000403.1-201ENST00000603349 851 ntBASIC3.88□□□□□ -1.79
SHFQ7M4L6 AC068276.1-201ENST00000605793 379 ntBASIC3.88□□□□□ -1.79
SHFQ7M4L6 AC097468.3-201ENST00000607956 456 ntBASIC3.88□□□□□ -1.79
SHFQ7M4L6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SHFQ7M4L6 AC009509.4-201ENST00000619202 509 ntBASIC3.88□□□□□ -1.79
SHFQ7M4L6 AC233309.1-201ENST00000619522 751 ntBASIC3.88□□□□□ -1.79
SHFQ7M4L6 AP005019.3-201ENST00000620418 560 ntBASIC3.88□□□□□ -1.79
SHFQ7M4L6 AC025048.6-202ENST00000627667 438 ntBASIC3.88□□□□□ -1.79
SHFQ7M4L6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.88□□□□□ -1.79
SHFQ7M4L6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SHFQ7M4L6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.88□□□□□ -1.79
SHFQ7M4L6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHFQ7M4L6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHFQ7M4L6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHFQ7M4L6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SHFQ7M4L6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHFQ7M4L6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHFQ7M4L6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHFQ7M4L6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHFQ7M4L6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC103591.2-201ENST00000265259 766 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 RNA5SP87-201ENST00000384155 118 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 RNY3P10-201ENST00000384764 102 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 MIR3074-201ENST00000384885 81 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 RPL31P1-201ENST00000398116 372 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AL049697.2-201ENST00000403708 294 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 MTCYBP36-201ENST00000404146 440 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 RNA5SP306-201ENST00000411087 107 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC008065.1-201ENST00000428525 348 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AL359265.2-201ENST00000434367 631 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 ST13P20-201ENST00000447996 1065 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC005297.2-201ENST00000450430 606 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 IFNWP4-201ENST00000453148 294 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 BX322784.1-201ENST00000455793 1077 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 RPL12P20-201ENST00000475538 479 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC017015.1-201ENST00000477387 286 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 PRELID3BP7-201ENST00000503606 469 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 IGHV3-32-201ENST00000519182 355 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 COX6CP8-201ENST00000522620 226 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 OR5BC1P-201ENST00000529327 739 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AGGF1P4-201ENST00000568249 801 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 RN7SL690P-201ENST00000582087 240 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 MIR3611-201ENST00000584484 83 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 MIR548AB-201ENST00000584917 84 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AL451086.1-201ENST00000605596 223 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC080013.4-201ENST00000607624 649 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AP000254.1-201ENST00000609934 520 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC007546.1-201ENST00000619452 559 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 AC074029.4-201ENST00000624796 1859 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 OR11H5P-202ENST00000641612 1325 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHFQ7M4L6 MTND4P4-201ENST00000439033 1366 ntBASIC3.87□□□□□ -1.79
SHFQ7M4L6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHFQ7M4L6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
SHFQ7M4L6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHFQ7M4L6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.86□□□□□ -1.79
SHFQ7M4L6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHFQ7M4L6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHFQ7M4L6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SHFQ7M4L6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SHFQ7M4L6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SHFQ7M4L6 RNU1-130P-201ENST00000363930 160 ntBASIC3.86□□□□□ -1.79
SHFQ7M4L6 SNORD113.2-201ENST00000364166 89 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms