Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3AQ05086 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3AQ05086 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3AQ05086 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3AQ05086 DEFB131D-201ENST00000526803 184 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3AQ05086 UBE2NP1-201ENST00000545592 458 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 ELOCP32-201ENST00000548625 324 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3AQ05086 RPL21P7-201ENST00000557463 483 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 AC107954.1-201ENST00000565906 727 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
UBE3AQ05086 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3AQ05086 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.41□□□□□ -1.7
UBE3AQ05086 AL353778.1-201ENST00000603149 408 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 AL355812.1-201ENST00000603215 216 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 RPL23AP92-201ENST00000603609 255 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 AL592436.1-201ENST00000605135 558 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 AC007390.2-201ENST00000606229 3803 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3AQ05086 OR6R2P-201ENST00000609216 300 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UBE3AQ05086 AC140113.4-201ENST00000622087 222 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3AQ05086 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3AQ05086 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UBE3AQ05086 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3AQ05086 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
UBE3AQ05086 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3AQ05086 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
UBE3AQ05086 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
UBE3AQ05086 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3AQ05086 ZNF542P-204ENST00000482727 1305 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 NUP58P1-201ENST00000502546 1738 ntBASIC4.41□□□□□ -1.7
UBE3AQ05086 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3AQ05086 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3AQ05086 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3AQ05086 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3AQ05086 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
UBE3AQ05086 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.4□□□□□ -1.7
UBE3AQ05086 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
UBE3AQ05086 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.4□□□□□ -1.7
UBE3AQ05086 AL356489.2-201ENST00000566968 3528 ntBASIC4.4□□□□□ -1.7
UBE3AQ05086 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
UBE3AQ05086 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
UBE3AQ05086 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
UBE3AQ05086 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
UBE3AQ05086 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.4□□□□□ -1.71
UBE3AQ05086 RNU6-213P-201ENST00000384051 104 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 MIR7-3-201ENST00000384898 110 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 RPL31P1-201ENST00000398116 372 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.4□□□□□ -1.71
UBE3AQ05086 RNU4-6P-201ENST00000410804 122 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 RAP1BP1-201ENST00000412709 553 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 AC107081.1-201ENST00000414975 361 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 VPS26BP1-201ENST00000417155 755 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 UBTFL3-201ENST00000418934 1024 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 FNDC3CP-201ENST00000420795 1155 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 RPL7P34-201ENST00000433316 712 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 GOT2P5-201ENST00000433995 546 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 NOTCH2P1-201ENST00000443481 624 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.4□□□□□ -1.71
UBE3AQ05086 MTCO3P11-201ENST00000455103 774 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 UBTFL6-201ENST00000477929 1024 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 DEFB109F-201ENST00000491870 277 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 AL139099.1-201ENST00000497398 403 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3AQ05086 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.4□□□□□ -1.71
UBE3AQ05086 AC006499.2-201ENST00000513470 337 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 HNRNPKP5-201ENST00000515300 253 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.4□□□□□ -1.71
UBE3AQ05086 AP003385.6-201ENST00000531603 374 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
UBE3AQ05086 CYCSP2-201ENST00000558168 301 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3AQ05086 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3AQ05086 AC002400.1-201ENST00000569310 726 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3AQ05086 AP003485.2-201ENST00000623636 610 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3AQ05086 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.4□□□□□ -1.71
UBE3AQ05086 AC103706.2-201ENST00000638080 240 ntBASIC4.4□□□□□ -1.71
UBE3AQ05086 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3AQ05086 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3AQ05086 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UBE3AQ05086 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
UBE3AQ05086 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3AQ05086 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
UBE3AQ05086 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
UBE3AQ05086 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3AQ05086 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3AQ05086 RNU6-761P-201ENST00000384148 107 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 SNORD96B-201ENST00000386148 79 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.39□□□□□ -1.71
UBE3AQ05086 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 AC012065.2-201ENST00000421295 375 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 AL953862.1-201ENST00000423016 168 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms